Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 Gm10076-201ENSMUST00000073238 384 ntBASIC12.83□□□□□ -0.36
Lhx3P50481 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Lhx3P50481 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Lhx3P50481 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
Lhx3P50481 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.83□□□□□ -0.36
Lhx3P50481 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.83□□□□□ -0.36
Lhx3P50481 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Lhx3P50481 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Lhx3P50481 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Lhx3P50481 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Lhx3P50481 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.82□□□□□ -0.36
Lhx3P50481 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Lhx3P50481 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Lhx3P50481 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lhx3P50481 Gm24255-201ENSMUST00000104481 128 ntBASIC12.82□□□□□ -0.36
Lhx3P50481 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Gm13350-201ENSMUST00000120519 479 ntBASIC12.82□□□□□ -0.36
Lhx3P50481 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.82□□□□□ -0.36
Lhx3P50481 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.82□□□□□ -0.36
Lhx3P50481 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Gm26956-201ENSMUST00000182176 986 ntBASIC12.82□□□□□ -0.36
Lhx3P50481 Gm27023-201ENSMUST00000182372 285 ntBASIC12.82□□□□□ -0.36
Lhx3P50481 Gm37259-201ENSMUST00000193903 849 ntBASIC12.82□□□□□ -0.36
Lhx3P50481 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.82□□□□□ -0.36
Lhx3P50481 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.82□□□□□ -0.36
Lhx3P50481 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.82□□□□□ -0.36
Lhx3P50481 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.82□□□□□ -0.36
Lhx3P50481 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Lhx3P50481 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.82□□□□□ -0.36
Lhx3P50481 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Lhx3P50481 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Lhx3P50481 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Lhx3P50481 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Lhx3P50481 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lhx3P50481 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.81□□□□□ -0.36
Lhx3P50481 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Lhx3P50481 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Gm22323-201ENSMUST00000103832 109 ntBASIC12.81□□□□□ -0.36
Lhx3P50481 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Gm13570-201ENSMUST00000140763 309 ntBASIC12.81□□□□□ -0.36
Lhx3P50481 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lhx3P50481 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.81□□□□□ -0.36
Lhx3P50481 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Gm18304-201ENSMUST00000189162 546 ntBASIC12.81□□□□□ -0.36
Lhx3P50481 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.81□□□□□ -0.36
Lhx3P50481 AC113031.8-201ENSMUST00000227856 631 ntBASIC12.81□□□□□ -0.36
Lhx3P50481 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Lhx3P50481 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Lhx3P50481 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms