Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.96□□□□□ -0.33
SftpbP50405 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SftpbP50405 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
SftpbP50405 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.96□□□□□ -0.33
SftpbP50405 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.96□□□□□ -0.33
SftpbP50405 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC12.96□□□□□ -0.33
SftpbP50405 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
SftpbP50405 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SftpbP50405 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
SftpbP50405 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SftpbP50405 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SftpbP50405 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SftpbP50405 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SftpbP50405 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
SftpbP50405 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SftpbP50405 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SftpbP50405 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SftpbP50405 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SftpbP50405 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
SftpbP50405 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.34
SftpbP50405 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.96□□□□□ -0.34
SftpbP50405 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SftpbP50405 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SftpbP50405 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
SftpbP50405 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SftpbP50405 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SftpbP50405 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SftpbP50405 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SftpbP50405 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SftpbP50405 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SftpbP50405 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SftpbP50405 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SftpbP50405 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SftpbP50405 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
SftpbP50405 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SftpbP50405 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SftpbP50405 Gm8805-201ENSMUST00000117848 313 ntBASIC12.95□□□□□ -0.34
SftpbP50405 Gm11618-201ENSMUST00000117946 267 ntBASIC12.95□□□□□ -0.34
SftpbP50405 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SftpbP50405 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SftpbP50405 Gm5866-201ENSMUST00000177881 973 ntBASIC12.95□□□□□ -0.34
SftpbP50405 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.95□□□□□ -0.34
SftpbP50405 Gm8463-201ENSMUST00000208573 613 ntBASIC12.95□□□□□ -0.34
SftpbP50405 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.95□□□□□ -0.34
SftpbP50405 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SftpbP50405 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SftpbP50405 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SftpbP50405 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SftpbP50405 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.95□□□□□ -0.34
SftpbP50405 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SftpbP50405 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SftpbP50405 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SftpbP50405 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
SftpbP50405 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
SftpbP50405 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SftpbP50405 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SftpbP50405 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.94□□□□□ -0.34
SftpbP50405 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.94□□□□□ -0.34
SftpbP50405 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.94□□□□□ -0.34
SftpbP50405 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Paupar-201ENSMUST00000194826 3482 ntBASIC12.94□□□□□ -0.34
SftpbP50405 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
SftpbP50405 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
SftpbP50405 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.94□□□□□ -0.34
SftpbP50405 Auts2-212ENSMUST00000178555 309 ntBASIC12.94□□□□□ -0.34
SftpbP50405 Gm28911-201ENSMUST00000188837 117 ntBASIC12.94□□□□□ -0.34
SftpbP50405 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.94□□□□□ -0.34
SftpbP50405 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.94□□□□□ -0.34
SftpbP50405 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Mir339-201ENSMUST00000083659 96 ntBASIC12.94□□□□□ -0.34
SftpbP50405 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.94□□□□□ -0.34
SftpbP50405 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SftpbP50405 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.94□□□□□ -0.34
SftpbP50405 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SftpbP50405 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SftpbP50405 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.94□□□□□ -0.34
SftpbP50405 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.93□□□□□ -0.34
SftpbP50405 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SftpbP50405 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms