Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.51□□□□□ -0.73
Nkx2-1P50220 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Gm27989-201ENSMUST00000184721 107 ntBASIC10.51□□□□□ -0.73
Nkx2-1P50220 Gm27838-201ENSMUST00000184829 128 ntBASIC10.51□□□□□ -0.73
Nkx2-1P50220 Mir7023-201ENSMUST00000185093 64 ntBASIC10.51□□□□□ -0.73
Nkx2-1P50220 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-1P50220 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.51□□□□□ -0.73
Nkx2-1P50220 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.51□□□□□ -0.73
Nkx2-1P50220 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Nkx2-1P50220 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Nkx2-1P50220 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.51□□□□□ -0.73
Nkx2-1P50220 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.51□□□□□ -0.73
Nkx2-1P50220 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.5□□□□□ -0.73
Nkx2-1P50220 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC10.5□□□□□ -0.73
Nkx2-1P50220 Gm6447-201ENSMUST00000118905 835 ntBASIC10.5□□□□□ -0.73
Nkx2-1P50220 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC10.5□□□□□ -0.73
Nkx2-1P50220 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.5□□□□□ -0.73
Nkx2-1P50220 Gm9630-201ENSMUST00000178304 885 ntBASIC10.5□□□□□ -0.73
Nkx2-1P50220 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Nkx2-1P50220 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 AC073947.2-201ENSMUST00000215888 1130 ntBASIC10.5□□□□□ -0.73
Nkx2-1P50220 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.5□□□□□ -0.73
Nkx2-1P50220 AC165157.4-201ENSMUST00000220587 139 ntBASIC10.5□□□□□ -0.73
Nkx2-1P50220 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Gm2238-201ENSMUST00000192074 3669 ntBASIC10.5□□□□□ -0.73
Nkx2-1P50220 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.5□□□□□ -0.73
Nkx2-1P50220 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nkx2-1P50220 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nkx2-1P50220 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms