Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4bP46467 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
Vps4bP46467 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Vps4bP46467 Gm8805-201ENSMUST00000117848 313 ntBASIC12.88□□□□□ -0.35
Vps4bP46467 Gm11637-201ENSMUST00000120601 592 ntBASIC12.88□□□□□ -0.35
Vps4bP46467 Gm13123-201ENSMUST00000122173 492 ntBASIC12.88□□□□□ -0.35
Vps4bP46467 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4bP46467 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4bP46467 Gm8099-201ENSMUST00000200510 742 ntBASIC12.88□□□□□ -0.35
Vps4bP46467 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.88□□□□□ -0.35
Vps4bP46467 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.88□□□□□ -0.35
Vps4bP46467 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.88□□□□□ -0.35
Vps4bP46467 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4bP46467 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4bP46467 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4bP46467 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4bP46467 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Vps4bP46467 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4bP46467 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Vps4bP46467 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Vps4bP46467 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4bP46467 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Vps4bP46467 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Vps4bP46467 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.88□□□□□ -0.35
Vps4bP46467 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Vps4bP46467 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.88□□□□□ -0.35
Vps4bP46467 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4bP46467 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Vps4bP46467 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4bP46467 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4bP46467 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vps4bP46467 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4bP46467 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.87□□□□□ -0.35
Vps4bP46467 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4bP46467 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4bP46467 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4bP46467 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.87□□□□□ -0.35
Vps4bP46467 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4bP46467 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vps4bP46467 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Vps4bP46467 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Vps4bP46467 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.87□□□□□ -0.35
Vps4bP46467 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.87□□□□□ -0.35
Vps4bP46467 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4bP46467 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4bP46467 Gm2231-201ENSMUST00000125661 612 ntBASIC12.87□□□□□ -0.35
Vps4bP46467 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4bP46467 Mir1982-201ENSMUST00000157368 74 ntBASIC12.87□□□□□ -0.35
Vps4bP46467 Proscos-202ENSMUST00000178990 666 ntBASIC12.87□□□□□ -0.35
Vps4bP46467 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.87□□□□□ -0.35
Vps4bP46467 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.87□□□□□ -0.35
Vps4bP46467 Gm5035-201ENSMUST00000215581 927 ntBASIC12.87□□□□□ -0.35
Vps4bP46467 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.87□□□□□ -0.35
Vps4bP46467 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4bP46467 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4bP46467 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4bP46467 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4bP46467 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4bP46467 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4bP46467 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.87□□□□□ -0.35
Vps4bP46467 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4bP46467 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.87□□□□□ -0.35
Vps4bP46467 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4bP46467 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4bP46467 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4bP46467 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4bP46467 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4bP46467 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vps4bP46467 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.86□□□□□ -0.35
Vps4bP46467 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vps4bP46467 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4bP46467 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4bP46467 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4bP46467 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Vps4bP46467 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4bP46467 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4bP46467 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4bP46467 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Vps4bP46467 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4bP46467 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4bP46467 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.86□□□□□ -0.35
Vps4bP46467 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4bP46467 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4bP46467 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4bP46467 Gm14704-201ENSMUST00000120300 874 ntBASIC12.86□□□□□ -0.35
Vps4bP46467 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4bP46467 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vps4bP46467 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
Vps4bP46467 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.86□□□□□ -0.35
Vps4bP46467 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vps4bP46467 Gm23363-201ENSMUST00000175024 79 ntBASIC12.86□□□□□ -0.35
Vps4bP46467 Gm9630-201ENSMUST00000178304 885 ntBASIC12.86□□□□□ -0.35
Vps4bP46467 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vps4bP46467 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.86□□□□□ -0.35
Vps4bP46467 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.86□□□□□ -0.35
Vps4bP46467 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Vps4bP46467 Gm8598-201ENSMUST00000221184 836 ntBASIC12.86□□□□□ -0.35
Vps4bP46467 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.86□□□□□ -0.35
Vps4bP46467 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.86□□□□□ -0.35
Vps4bP46467 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms