Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Gm27701-201ENSMUST00000184498 110 ntBASIC12.23□□□□□ -0.45
Tnfsf4P43488 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.23□□□□□ -0.45
Tnfsf4P43488 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Tnfsf4P43488 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Tnfsf4P43488 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.22□□□□□ -0.45
Tnfsf4P43488 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Gm28911-201ENSMUST00000188837 117 ntBASIC12.22□□□□□ -0.45
Tnfsf4P43488 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.22□□□□□ -0.45
Tnfsf4P43488 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.22□□□□□ -0.45
Tnfsf4P43488 Gm8598-201ENSMUST00000221184 836 ntBASIC12.22□□□□□ -0.45
Tnfsf4P43488 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.22□□□□□ -0.45
Tnfsf4P43488 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.22□□□□□ -0.45
Tnfsf4P43488 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.22□□□□□ -0.45
Tnfsf4P43488 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Proscos-202ENSMUST00000178990 666 ntBASIC12.21□□□□□ -0.45
Tnfsf4P43488 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Gm19184-201ENSMUST00000196798 928 ntBASIC12.21□□□□□ -0.45
Tnfsf4P43488 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.21□□□□□ -0.45
Tnfsf4P43488 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Tnfsf4P43488 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms