Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Gm9230-201ENSMUST00000188228 532 ntBASIC12.03□□□□□ -0.48
Cdx2P43241 Gm42937-201ENSMUST00000197360 752 ntBASIC12.03□□□□□ -0.48
Cdx2P43241 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cdx2P43241 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC12.03□□□□□ -0.48
Cdx2P43241 Gm5051-201ENSMUST00000204085 485 ntBASIC12.03□□□□□ -0.48
Cdx2P43241 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdx2P43241 AC159819.2-201ENSMUST00000216151 342 ntBASIC12.03□□□□□ -0.48
Cdx2P43241 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cdx2P43241 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cdx2P43241 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdx2P43241 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Cdx2P43241 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdx2P43241 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.03□□□□□ -0.48
Cdx2P43241 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdx2P43241 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdx2P43241 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Cdx2P43241 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdx2P43241 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdx2P43241 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdx2P43241 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
Cdx2P43241 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.02□□□□□ -0.48
Cdx2P43241 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.48
Cdx2P43241 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cdx2P43241 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx2P43241 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx2P43241 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx2P43241 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx2P43241 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.02□□□□□ -0.49
Cdx2P43241 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx2P43241 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.02□□□□□ -0.49
Cdx2P43241 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdx2P43241 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdx2P43241 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.02□□□□□ -0.49
Cdx2P43241 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC12.02□□□□□ -0.49
Cdx2P43241 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Cdx2P43241 D9Wsu149-201ENSMUST00000214169 594 ntBASIC12.02□□□□□ -0.49
Cdx2P43241 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.02□□□□□ -0.49
Cdx2P43241 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx2P43241 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.02□□□□□ -0.49
Cdx2P43241 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx2P43241 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx2P43241 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cdx2P43241 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx2P43241 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx2P43241 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Cdx2P43241 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx2P43241 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cdx2P43241 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx2P43241 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx2P43241 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx2P43241 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cdx2P43241 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cdx2P43241 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx2P43241 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx2P43241 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cdx2P43241 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cdx2P43241 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx2P43241 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx2P43241 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cdx2P43241 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cdx2P43241 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.01□□□□□ -0.49
Cdx2P43241 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cdx2P43241 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cdx2P43241 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Cdx2P43241 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cdx2P43241 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.01□□□□□ -0.49
Cdx2P43241 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 Gm5616-201ENSMUST00000165252 384 ntBASIC12.01□□□□□ -0.49
Cdx2P43241 Gm8741-201ENSMUST00000174736 384 ntBASIC12.01□□□□□ -0.49
Cdx2P43241 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.01□□□□□ -0.49
Cdx2P43241 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.01□□□□□ -0.49
Cdx2P43241 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cdx2P43241 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.01□□□□□ -0.49
Cdx2P43241 Ntng1-201ENSMUST00000051253 327 ntBASIC12.01□□□□□ -0.49
Cdx2P43241 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms