Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
HttP42859 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
HttP42859 Gm14942-201ENSMUST00000119642 336 ntBASIC13.08□□□□□ -0.32
HttP42859 Gm34379-201ENSMUST00000195036 290 ntBASIC13.08□□□□□ -0.32
HttP42859 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC13.08□□□□□ -0.32
HttP42859 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
HttP42859 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HttP42859 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
HttP42859 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
HttP42859 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
HttP42859 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HttP42859 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
HttP42859 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HttP42859 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HttP42859 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.07□□□□□ -0.32
HttP42859 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
HttP42859 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
HttP42859 Gm42430-201ENSMUST00000197209 616 ntBASIC13.07□□□□□ -0.32
HttP42859 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HttP42859 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC13.07□□□□□ -0.32
HttP42859 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HttP42859 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HttP42859 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HttP42859 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
HttP42859 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HttP42859 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HttP42859 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.07□□□□□ -0.32
HttP42859 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HttP42859 Gm15004-201ENSMUST00000119192 630 ntBASIC13.07□□□□□ -0.32
HttP42859 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HttP42859 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HttP42859 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HttP42859 Gm44506-201ENSMUST00000206278 965 ntBASIC13.07□□□□□ -0.32
HttP42859 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HttP42859 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HttP42859 Olfr63-201ENSMUST00000067840 955 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
HttP42859 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
HttP42859 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HttP42859 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HttP42859 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
HttP42859 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
HttP42859 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
HttP42859 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HttP42859 Acot6-202ENSMUST00000222921 3622 ntBASIC13.07□□□□□ -0.32
HttP42859 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
HttP42859 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HttP42859 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
HttP42859 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
HttP42859 Gm4310-201ENSMUST00000177847 889 ntBASIC13.06□□□□□ -0.32
HttP42859 Gm9022-201ENSMUST00000182482 992 ntBASIC13.06□□□□□ -0.32
HttP42859 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
HttP42859 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
HttP42859 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
HttP42859 Gm13171-201ENSMUST00000117233 391 ntBASIC13.06□□□□□ -0.32
HttP42859 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 AC154436.1-201ENSMUST00000227272 782 ntBASIC13.06□□□□□ -0.32
HttP42859 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.06□□□□□ -0.32
HttP42859 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Gm14993-201ENSMUST00000121180 164 ntBASIC13.06□□□□□ -0.32
HttP42859 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC13.06□□□□□ -0.32
HttP42859 Gm8436-201ENSMUST00000210152 1080 ntBASIC13.06□□□□□ -0.32
HttP42859 Gm5749-201ENSMUST00000210673 1090 ntBASIC13.06□□□□□ -0.32
HttP42859 AC142266.1-201ENSMUST00000228107 415 ntBASIC13.06□□□□□ -0.32
HttP42859 Gm6564-201ENSMUST00000075377 619 ntBASIC13.06□□□□□ -0.32
HttP42859 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
HttP42859 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
HttP42859 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HttP42859 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HttP42859 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HttP42859 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Gm29808-201ENSMUST00000194419 468 ntBASIC13.05□□□□□ -0.32
HttP42859 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HttP42859 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms