Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cd27P41272 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cd27P41272 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cd27P41272 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cd27P41272 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC10.19□□□□□ -0.78
Cd27P41272 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cd27P41272 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cd27P41272 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Cd27P41272 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Gm27194-201ENSMUST00000175753 2936 ntBASIC10.18□□□□□ -0.78
Cd27P41272 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cd27P41272 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC10.18□□□□□ -0.78
Cd27P41272 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.18□□□□□ -0.78
Cd27P41272 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC10.18□□□□□ -0.78
Cd27P41272 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.18□□□□□ -0.78
Cd27P41272 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.18□□□□□ -0.78
Cd27P41272 AC140406.1-201ENSMUST00000226481 465 ntBASIC10.18□□□□□ -0.78
Cd27P41272 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.18□□□□□ -0.78
Cd27P41272 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.18□□□□□ -0.78
Cd27P41272 Gm22058-201ENSMUST00000083393 310 ntBASIC10.18□□□□□ -0.78
Cd27P41272 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Cd27P41272 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
Cd27P41272 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cd27P41272 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.18□□□□□ -0.78
Cd27P41272 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cd27P41272 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC10.17□□□□□ -0.78
Cd27P41272 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.17□□□□□ -0.78
Cd27P41272 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC10.17□□□□□ -0.78
Cd27P41272 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Cd27P41272 Gm11793-201ENSMUST00000120433 981 ntBASIC10.17□□□□□ -0.78
Cd27P41272 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC10.17□□□□□ -0.78
Cd27P41272 Gm14760-201ENSMUST00000121831 999 ntBASIC10.17□□□□□ -0.78
Cd27P41272 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC10.17□□□□□ -0.78
Cd27P41272 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Cd27P41272 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC10.17□□□□□ -0.78
Cd27P41272 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.17□□□□□ -0.78
Cd27P41272 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.17□□□□□ -0.78
Cd27P41272 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC10.17□□□□□ -0.78
Cd27P41272 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC10.17□□□□□ -0.78
Cd27P41272 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Cd27P41272 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Cd27P41272 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.17□□□□□ -0.78
Cd27P41272 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Cd27P41272 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.17□□□□□ -0.78
Cd27P41272 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.17□□□□□ -0.78
Cd27P41272 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cd27P41272 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms