Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Gm26035-201ENSMUST00000083065 308 ntBASIC18.56■□□□□ 0.56
Chd1P40201 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1P40201 Gm37795-201ENSMUST00000194216 2459 ntBASIC18.56■□□□□ 0.56
Chd1P40201 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1P40201 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1P40201 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1P40201 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Chd1P40201 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Chd1P40201 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Chd1P40201 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1P40201 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1P40201 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Chd1P40201 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1P40201 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Chd1P40201 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
Chd1P40201 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1P40201 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Chd1P40201 Gm11500-201ENSMUST00000118237 601 ntBASIC18.55■□□□□ 0.56
Chd1P40201 Gm9089-201ENSMUST00000122027 526 ntBASIC18.55■□□□□ 0.56
Chd1P40201 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1P40201 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Chd1P40201 Gm37782-201ENSMUST00000194879 678 ntBASIC18.55■□□□□ 0.56
Chd1P40201 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1P40201 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1P40201 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1P40201 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Chd1P40201 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1P40201 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Chd1P40201 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1P40201 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1P40201 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC18.55■□□□□ 0.56
Chd1P40201 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.55■□□□□ 0.56
Chd1P40201 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1P40201 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1P40201 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1P40201 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Chd1P40201 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Chd1P40201 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Chd1P40201 Gm45758-201ENSMUST00000212448 1006 ntBASIC18.54■□□□□ 0.56
Chd1P40201 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1P40201 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC18.54■□□□□ 0.56
Chd1P40201 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1P40201 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Chd1P40201 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1P40201 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1P40201 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1P40201 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1P40201 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Chd1P40201 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1P40201 AC129931.1-201ENSMUST00000228865 1861 ntBASIC18.54■□□□□ 0.56
Chd1P40201 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1P40201 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1P40201 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1P40201 Gm43056-201ENSMUST00000197865 2791 ntBASIC18.54■□□□□ 0.56
Chd1P40201 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1P40201 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1P40201 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
Chd1P40201 Gm45135-201ENSMUST00000206787 1184 ntBASIC18.54■□□□□ 0.56
Chd1P40201 Gm7904-201ENSMUST00000217049 465 ntBASIC18.54■□□□□ 0.56
Chd1P40201 CT009527.1-201ENSMUST00000224205 339 ntBASIC18.54■□□□□ 0.56
Chd1P40201 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1P40201 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1P40201 Gm36970-201ENSMUST00000193688 1859 ntBASIC18.54■□□□□ 0.56
Chd1P40201 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1P40201 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Chd1P40201 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Chd1P40201 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1P40201 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1P40201 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1P40201 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1P40201 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1P40201 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1P40201 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1P40201 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1P40201 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1P40201 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1P40201 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Chd1P40201 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1P40201 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1P40201 Ighv1-86-201ENSMUST00000200562 353 ntBASIC18.53■□□□□ 0.56
Chd1P40201 AC113082.1-201ENSMUST00000217324 327 ntBASIC18.53■□□□□ 0.56
Chd1P40201 AC158392.3-201ENSMUST00000224271 1284 ntBASIC18.53■□□□□ 0.56
Chd1P40201 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1P40201 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1P40201 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1P40201 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1P40201 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1P40201 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC18.53■□□□□ 0.56
Chd1P40201 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1P40201 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1P40201 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Chd1P40201 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC18.53■□□□□ 0.56
Chd1P40201 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1P40201 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1P40201 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Chd1P40201 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1P40201 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Chd1P40201 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC18.52■□□□□ 0.56
Chd1P40201 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Chd1P40201 Gm13204-201ENSMUST00000120110 821 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms