Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk2P38575 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.12□□□□□ -0.63
Upk2P38575 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk2P38575 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.12□□□□□ -0.63
Upk2P38575 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Upk2P38575 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk2P38575 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Upk2P38575 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Upk2P38575 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Upk2P38575 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Upk2P38575 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Gm12384-201ENSMUST00000119228 919 ntBASIC11.11□□□□□ -0.63
Upk2P38575 Gm13492-201ENSMUST00000119772 665 ntBASIC11.11□□□□□ -0.63
Upk2P38575 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.11□□□□□ -0.63
Upk2P38575 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.11□□□□□ -0.63
Upk2P38575 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Gm7063-201ENSMUST00000186840 981 ntBASIC11.11□□□□□ -0.63
Upk2P38575 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.11□□□□□ -0.63
Upk2P38575 Gm44124-201ENSMUST00000204159 472 ntBASIC11.11□□□□□ -0.63
Upk2P38575 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.11□□□□□ -0.63
Upk2P38575 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC11.11□□□□□ -0.63
Upk2P38575 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.11□□□□□ -0.63
Upk2P38575 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.11□□□□□ -0.63
Upk2P38575 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Upk2P38575 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.11□□□□□ -0.63
Upk2P38575 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Upk2P38575 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.11□□□□□ -0.63
Upk2P38575 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Upk2P38575 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Upk2P38575 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Upk2P38575 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.1□□□□□ -0.63
Upk2P38575 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
Upk2P38575 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Upk2P38575 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.1□□□□□ -0.63
Upk2P38575 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
Upk2P38575 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Upk2P38575 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.1□□□□□ -0.63
Upk2P38575 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.1□□□□□ -0.63
Upk2P38575 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.1□□□□□ -0.63
Upk2P38575 Gm6266-201ENSMUST00000203844 806 ntBASIC11.1□□□□□ -0.63
Upk2P38575 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.1□□□□□ -0.63
Upk2P38575 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Upk2P38575 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.1□□□□□ -0.63
Upk2P38575 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Upk2P38575 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.1□□□□□ -0.63
Upk2P38575 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Upk2P38575 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.1□□□□□ -0.63
Upk2P38575 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Upk2P38575 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Upk2P38575 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms