Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
HmgclP38060 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.5□□□□□ -0.41
HmgclP38060 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
HmgclP38060 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HmgclP38060 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
HmgclP38060 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.5□□□□□ -0.41
HmgclP38060 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
HmgclP38060 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
HmgclP38060 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
HmgclP38060 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.49□□□□□ -0.41
HmgclP38060 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
HmgclP38060 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.49□□□□□ -0.41
HmgclP38060 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.49□□□□□ -0.41
HmgclP38060 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
HmgclP38060 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.49□□□□□ -0.41
HmgclP38060 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
HmgclP38060 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Gm24548-201ENSMUST00000158650 108 ntBASIC12.49□□□□□ -0.41
HmgclP38060 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Gm9630-201ENSMUST00000178304 885 ntBASIC12.49□□□□□ -0.41
HmgclP38060 Gm5370-201ENSMUST00000187187 574 ntBASIC12.49□□□□□ -0.41
HmgclP38060 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.49□□□□□ -0.41
HmgclP38060 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.49□□□□□ -0.41
HmgclP38060 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.49□□□□□ -0.41
HmgclP38060 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.49□□□□□ -0.41
HmgclP38060 Gm45930-201ENSMUST00000221330 292 ntBASIC12.49□□□□□ -0.41
HmgclP38060 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
HmgclP38060 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
HmgclP38060 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
HmgclP38060 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
HmgclP38060 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
HmgclP38060 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HmgclP38060 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
HmgclP38060 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HmgclP38060 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HmgclP38060 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.48□□□□□ -0.41
HmgclP38060 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HmgclP38060 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HmgclP38060 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HmgclP38060 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.48□□□□□ -0.41
HmgclP38060 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
HmgclP38060 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HmgclP38060 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
HmgclP38060 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.48□□□□□ -0.41
HmgclP38060 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.48□□□□□ -0.41
HmgclP38060 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
HmgclP38060 Gm24231-201ENSMUST00000104315 133 ntBASIC12.48□□□□□ -0.41
HmgclP38060 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.48□□□□□ -0.41
HmgclP38060 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.48□□□□□ -0.41
HmgclP38060 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HmgclP38060 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HmgclP38060 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HmgclP38060 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HmgclP38060 Gm5904-201ENSMUST00000210286 865 ntBASIC12.48□□□□□ -0.41
HmgclP38060 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HmgclP38060 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.48□□□□□ -0.41
HmgclP38060 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HmgclP38060 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HmgclP38060 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
HmgclP38060 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HmgclP38060 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC12.48□□□□□ -0.41
HmgclP38060 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HmgclP38060 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HmgclP38060 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
HmgclP38060 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HmgclP38060 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
HmgclP38060 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
HmgclP38060 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HmgclP38060 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HmgclP38060 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
HmgclP38060 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms