Protein–RNA interactions for Protein: P35822

Ptprk, Receptor-type tyrosine-protein phosphatase kappa, mousemouse

Predictions only

Length 1,457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtprkP35822 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PtprkP35822 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PtprkP35822 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
PtprkP35822 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PtprkP35822 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PtprkP35822 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PtprkP35822 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PtprkP35822 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PtprkP35822 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
PtprkP35822 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PtprkP35822 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PtprkP35822 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC19.79■□□□□ 0.76
PtprkP35822 Gm44980-201ENSMUST00000205826 314 ntBASIC19.79■□□□□ 0.76
PtprkP35822 Gm7395-201ENSMUST00000216059 1045 ntBASIC19.79■□□□□ 0.76
PtprkP35822 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PtprkP35822 Gm9129-201ENSMUST00000218173 1689 ntBASIC19.79■□□□□ 0.76
PtprkP35822 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Gm12579-201ENSMUST00000118040 783 ntBASIC19.79■□□□□ 0.76
PtprkP35822 Gm14219-201ENSMUST00000120414 288 ntBASIC19.79■□□□□ 0.76
PtprkP35822 Gm13182-201ENSMUST00000122241 312 ntBASIC19.79■□□□□ 0.76
PtprkP35822 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Gm9797-202ENSMUST00000218003 294 ntBASIC19.79■□□□□ 0.76
PtprkP35822 CT025602.2-201ENSMUST00000226553 772 ntBASIC19.79■□□□□ 0.76
PtprkP35822 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PtprkP35822 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PtprkP35822 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PtprkP35822 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PtprkP35822 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC19.78■□□□□ 0.76
PtprkP35822 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PtprkP35822 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PtprkP35822 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PtprkP35822 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PtprkP35822 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PtprkP35822 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PtprkP35822 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PtprkP35822 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PtprkP35822 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PtprkP35822 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PtprkP35822 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PtprkP35822 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC19.78■□□□□ 0.76
PtprkP35822 Ighv1-48-201ENSMUST00000191795 294 ntBASIC19.78■□□□□ 0.76
PtprkP35822 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PtprkP35822 Gm43520-201ENSMUST00000197996 164 ntBASIC19.78■□□□□ 0.76
PtprkP35822 AC166344.1-201ENSMUST00000223745 674 ntBASIC19.78■□□□□ 0.76
PtprkP35822 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PtprkP35822 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PtprkP35822 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PtprkP35822 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PtprkP35822 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PtprkP35822 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PtprkP35822 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PtprkP35822 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PtprkP35822 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PtprkP35822 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PtprkP35822 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC19.77■□□□□ 0.76
PtprkP35822 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PtprkP35822 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PtprkP35822 Gm14247-201ENSMUST00000120950 237 ntBASIC19.77■□□□□ 0.76
PtprkP35822 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC19.77■□□□□ 0.76
PtprkP35822 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC19.77■□□□□ 0.76
PtprkP35822 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PtprkP35822 Gm28388-201ENSMUST00000186262 437 ntBASIC19.77■□□□□ 0.76
PtprkP35822 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC19.77■□□□□ 0.76
PtprkP35822 Gm5298-201ENSMUST00000201122 892 ntBASIC19.77■□□□□ 0.76
PtprkP35822 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC19.77■□□□□ 0.76
PtprkP35822 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PtprkP35822 AC122408.1-201ENSMUST00000218949 218 ntBASIC19.77■□□□□ 0.76
PtprkP35822 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC19.77■□□□□ 0.76
PtprkP35822 Gm10288-201ENSMUST00000084614 537 ntBASIC19.77■□□□□ 0.76
PtprkP35822 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PtprkP35822 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PtprkP35822 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
PtprkP35822 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PtprkP35822 Gm9361-201ENSMUST00000198695 1507 ntBASIC19.77■□□□□ 0.75
PtprkP35822 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PtprkP35822 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PtprkP35822 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PtprkP35822 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC19.76■□□□□ 0.75
PtprkP35822 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms