Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rfc1P35601 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rfc1P35601 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc1P35601 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
Rfc1P35601 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.37□□□□□ -0.27
Rfc1P35601 Gm18905-201ENSMUST00000205454 928 ntBASIC13.37□□□□□ -0.27
Rfc1P35601 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.37□□□□□ -0.27
Rfc1P35601 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.37□□□□□ -0.27
Rfc1P35601 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.37□□□□□ -0.27
Rfc1P35601 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc1P35601 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rfc1P35601 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc1P35601 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc1P35601 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc1P35601 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc1P35601 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rfc1P35601 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc1P35601 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc1P35601 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc1P35601 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rfc1P35601 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc1P35601 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc1P35601 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc1P35601 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.37□□□□□ -0.27
Rfc1P35601 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Rfc1P35601 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfc1P35601 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.36□□□□□ -0.27
Rfc1P35601 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.36□□□□□ -0.27
Rfc1P35601 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.36□□□□□ -0.27
Rfc1P35601 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Rfc1P35601 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Gm27989-201ENSMUST00000184721 107 ntBASIC13.36□□□□□ -0.27
Rfc1P35601 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
Rfc1P35601 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Gm17330-201ENSMUST00000221047 165 ntBASIC13.36□□□□□ -0.27
Rfc1P35601 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.36□□□□□ -0.27
Rfc1P35601 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.36□□□□□ -0.27
Rfc1P35601 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Rfc1P35601 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.36□□□□□ -0.27
Rfc1P35601 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Rfc1P35601 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rfc1P35601 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfc1P35601 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc1P35601 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.35□□□□□ -0.27
Rfc1P35601 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc1P35601 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc1P35601 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc1P35601 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc1P35601 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc1P35601 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc1P35601 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc1P35601 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc1P35601 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc1P35601 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.35□□□□□ -0.27
Rfc1P35601 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.35□□□□□ -0.27
Rfc1P35601 Gm15920-201ENSMUST00000118998 402 ntBASIC13.35□□□□□ -0.27
Rfc1P35601 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.35□□□□□ -0.27
Rfc1P35601 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.35□□□□□ -0.27
Rfc1P35601 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc1P35601 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.35□□□□□ -0.27
Rfc1P35601 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc1P35601 Gm27772-201ENSMUST00000184900 187 ntBASIC13.35□□□□□ -0.27
Rfc1P35601 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc1P35601 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.35□□□□□ -0.27
Rfc1P35601 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rfc1P35601 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Rfc1P35601 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc1P35601 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.35□□□□□ -0.27
Rfc1P35601 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc1P35601 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc1P35601 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc1P35601 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Rfc1P35601 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc1P35601 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc1P35601 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Rfc1P35601 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Rfc1P35601 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.35□□□□□ -0.27
Rfc1P35601 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Rfc1P35601 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms