Protein–RNA interactions for Protein: P31001

Des, Desmin, mousemouse

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DesP31001 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.13□□□□□ -0.31
DesP31001 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Gm14928-201ENSMUST00000120198 477 ntBASIC13.13□□□□□ -0.31
DesP31001 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
DesP31001 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.13□□□□□ -0.31
DesP31001 Gm8463-201ENSMUST00000208573 613 ntBASIC13.13□□□□□ -0.31
DesP31001 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Gm6180-201ENSMUST00000065243 498 ntBASIC13.13□□□□□ -0.31
DesP31001 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
DesP31001 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.13□□□□□ -0.31
DesP31001 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
DesP31001 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
DesP31001 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DesP31001 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.12□□□□□ -0.31
DesP31001 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.12□□□□□ -0.31
DesP31001 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
DesP31001 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DesP31001 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
DesP31001 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
DesP31001 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.12□□□□□ -0.31
DesP31001 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
DesP31001 Gm11618-201ENSMUST00000117946 267 ntBASIC13.12□□□□□ -0.31
DesP31001 Gm13612-201ENSMUST00000119276 390 ntBASIC13.12□□□□□ -0.31
DesP31001 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DesP31001 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DesP31001 Gm9908-201ENSMUST00000211534 448 ntBASIC13.12□□□□□ -0.31
DesP31001 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
DesP31001 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.12□□□□□ -0.31
DesP31001 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DesP31001 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DesP31001 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DesP31001 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.12□□□□□ -0.31
DesP31001 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DesP31001 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DesP31001 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DesP31001 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
DesP31001 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
DesP31001 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
DesP31001 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
DesP31001 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
DesP31001 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
DesP31001 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.11□□□□□ -0.31
DesP31001 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DesP31001 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
DesP31001 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.11□□□□□ -0.31
DesP31001 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
DesP31001 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
DesP31001 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DesP31001 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DesP31001 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
DesP31001 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC13.11□□□□□ -0.31
DesP31001 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DesP31001 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DesP31001 Gm28693-202ENSMUST00000190758 331 ntBASIC13.11□□□□□ -0.31
DesP31001 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.11□□□□□ -0.31
DesP31001 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.11□□□□□ -0.31
DesP31001 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DesP31001 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.11□□□□□ -0.31
DesP31001 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DesP31001 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DesP31001 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
DesP31001 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
DesP31001 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
DesP31001 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DesP31001 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
DesP31001 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
DesP31001 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.11□□□□□ -0.31
DesP31001 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
DesP31001 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DesP31001 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
DesP31001 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
DesP31001 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DesP31001 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
DesP31001 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
DesP31001 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DesP31001 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
DesP31001 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
DesP31001 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms