Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VtnP29788 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.51□□□□□ -0.57
VtnP29788 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VtnP29788 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VtnP29788 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.51□□□□□ -0.57
VtnP29788 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VtnP29788 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.51□□□□□ -0.57
VtnP29788 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VtnP29788 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
VtnP29788 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.51□□□□□ -0.57
VtnP29788 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.51□□□□□ -0.57
VtnP29788 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.51□□□□□ -0.57
VtnP29788 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.51□□□□□ -0.57
VtnP29788 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.51□□□□□ -0.57
VtnP29788 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VtnP29788 Gm38158-201ENSMUST00000194617 339 ntBASIC11.51□□□□□ -0.57
VtnP29788 Gm43758-201ENSMUST00000199500 367 ntBASIC11.51□□□□□ -0.57
VtnP29788 Gm7783-201ENSMUST00000204795 781 ntBASIC11.51□□□□□ -0.57
VtnP29788 Gm18935-201ENSMUST00000212692 664 ntBASIC11.51□□□□□ -0.57
VtnP29788 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.51□□□□□ -0.57
VtnP29788 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VtnP29788 Cts7-204ENSMUST00000225321 1257 ntBASIC11.51□□□□□ -0.57
VtnP29788 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VtnP29788 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VtnP29788 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VtnP29788 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
VtnP29788 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VtnP29788 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VtnP29788 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VtnP29788 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.51□□□□□ -0.57
VtnP29788 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.51□□□□□ -0.57
VtnP29788 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.51□□□□□ -0.57
VtnP29788 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VtnP29788 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.51□□□□□ -0.57
VtnP29788 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VtnP29788 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
VtnP29788 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.51□□□□□ -0.57
VtnP29788 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VtnP29788 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
VtnP29788 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.5□□□□□ -0.57
VtnP29788 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.5□□□□□ -0.57
VtnP29788 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.5□□□□□ -0.57
VtnP29788 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
VtnP29788 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.5□□□□□ -0.57
VtnP29788 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.5□□□□□ -0.57
VtnP29788 Gm14921-201ENSMUST00000118643 908 ntBASIC11.5□□□□□ -0.57
VtnP29788 Gm11591-201ENSMUST00000120063 702 ntBASIC11.5□□□□□ -0.57
VtnP29788 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Gm27243-201ENSMUST00000183964 521 ntBASIC11.5□□□□□ -0.57
VtnP29788 Gm38266-201ENSMUST00000194931 421 ntBASIC11.5□□□□□ -0.57
VtnP29788 Gm42627-201ENSMUST00000197347 224 ntBASIC11.5□□□□□ -0.57
VtnP29788 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.5□□□□□ -0.57
VtnP29788 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.5□□□□□ -0.57
VtnP29788 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.5□□□□□ -0.57
VtnP29788 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.5□□□□□ -0.57
VtnP29788 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
VtnP29788 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.5□□□□□ -0.57
VtnP29788 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.5□□□□□ -0.57
VtnP29788 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.5□□□□□ -0.57
VtnP29788 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
VtnP29788 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
VtnP29788 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
VtnP29788 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.5□□□□□ -0.57
VtnP29788 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
VtnP29788 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
VtnP29788 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
VtnP29788 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VtnP29788 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
VtnP29788 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
VtnP29788 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VtnP29788 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VtnP29788 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
VtnP29788 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VtnP29788 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
VtnP29788 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
VtnP29788 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms