Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hmgn1P18608 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Hmgn1P18608 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hmgn1P18608 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hmgn1P18608 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Hmgn1P18608 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Hmgn1P18608 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Hmgn1P18608 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hmgn1P18608 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hmgn1P18608 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hmgn1P18608 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hmgn1P18608 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hmgn1P18608 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hmgn1P18608 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hmgn1P18608 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hmgn1P18608 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hmgn1P18608 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hmgn1P18608 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Hmgn1P18608 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Hmgn1P18608 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Hmgn1P18608 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Hmgn1P18608 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Hmgn1P18608 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Hmgn1P18608 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.58□□□□□ -0.56
Hmgn1P18608 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn1P18608 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.58□□□□□ -0.56
Hmgn1P18608 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Hmgn1P18608 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.58□□□□□ -0.56
Hmgn1P18608 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.58□□□□□ -0.56
Hmgn1P18608 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn1P18608 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn1P18608 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn1P18608 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Hmgn1P18608 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Hmgn1P18608 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn1P18608 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn1P18608 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn1P18608 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.58□□□□□ -0.56
Hmgn1P18608 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.58□□□□□ -0.56
Hmgn1P18608 Gm18307-201ENSMUST00000206864 949 ntBASIC11.58□□□□□ -0.56
Hmgn1P18608 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.58□□□□□ -0.56
Hmgn1P18608 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn1P18608 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.58□□□□□ -0.56
Hmgn1P18608 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn1P18608 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn1P18608 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn1P18608 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Hmgn1P18608 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Hmgn1P18608 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn1P18608 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Hmgn1P18608 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn1P18608 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn1P18608 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Hmgn1P18608 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn1P18608 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn1P18608 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn1P18608 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn1P18608 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Hmgn1P18608 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hmgn1P18608 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Hmgn1P18608 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.57□□□□□ -0.56
Hmgn1P18608 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Hmgn1P18608 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.57□□□□□ -0.56
Hmgn1P18608 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
Hmgn1P18608 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
Hmgn1P18608 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.57□□□□□ -0.56
Hmgn1P18608 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.57□□□□□ -0.56
Hmgn1P18608 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Hmgn1P18608 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.57□□□□□ -0.56
Hmgn1P18608 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.57□□□□□ -0.56
Hmgn1P18608 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.57□□□□□ -0.56
Hmgn1P18608 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.57□□□□□ -0.56
Hmgn1P18608 AC139382.1-201ENSMUST00000221402 498 ntBASIC11.57□□□□□ -0.56
Hmgn1P18608 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.57□□□□□ -0.56
Hmgn1P18608 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.57□□□□□ -0.56
Hmgn1P18608 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Hmgn1P18608 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms