Protein–RNA interactions for Protein: P15409

Rho, Rhodopsin, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RhoP15409 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.8□□□□□ -0.36
RhoP15409 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.8□□□□□ -0.36
RhoP15409 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.8□□□□□ -0.36
RhoP15409 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RhoP15409 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RhoP15409 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RhoP15409 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RhoP15409 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
RhoP15409 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RhoP15409 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.8□□□□□ -0.36
RhoP15409 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RhoP15409 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
RhoP15409 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RhoP15409 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RhoP15409 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
RhoP15409 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
RhoP15409 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RhoP15409 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.8□□□□□ -0.36
RhoP15409 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
RhoP15409 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
RhoP15409 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
RhoP15409 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RhoP15409 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
RhoP15409 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RhoP15409 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RhoP15409 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RhoP15409 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RhoP15409 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RhoP15409 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.79□□□□□ -0.36
RhoP15409 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RhoP15409 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RhoP15409 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RhoP15409 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
RhoP15409 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
RhoP15409 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.79□□□□□ -0.36
RhoP15409 Gm14644-201ENSMUST00000116671 647 ntBASIC12.79□□□□□ -0.36
RhoP15409 Gm9083-201ENSMUST00000120423 819 ntBASIC12.79□□□□□ -0.36
RhoP15409 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.79□□□□□ -0.36
RhoP15409 Gm12176-201ENSMUST00000121420 875 ntBASIC12.79□□□□□ -0.36
RhoP15409 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC12.79□□□□□ -0.36
RhoP15409 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.79□□□□□ -0.36
RhoP15409 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
RhoP15409 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RhoP15409 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RhoP15409 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
RhoP15409 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RhoP15409 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
RhoP15409 Gm37986-201ENSMUST00000193285 383 ntBASIC12.79□□□□□ -0.36
RhoP15409 Gm17812-201ENSMUST00000204935 318 ntBASIC12.79□□□□□ -0.36
RhoP15409 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
RhoP15409 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
RhoP15409 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RhoP15409 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
RhoP15409 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.79□□□□□ -0.36
RhoP15409 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RhoP15409 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.79□□□□□ -0.36
RhoP15409 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RhoP15409 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
RhoP15409 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
RhoP15409 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.79□□□□□ -0.36
RhoP15409 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
RhoP15409 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.79□□□□□ -0.36
RhoP15409 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
RhoP15409 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RhoP15409 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RhoP15409 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RhoP15409 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RhoP15409 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RhoP15409 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RhoP15409 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.78□□□□□ -0.36
RhoP15409 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RhoP15409 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RhoP15409 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.78□□□□□ -0.36
RhoP15409 Gm37666-201ENSMUST00000194110 866 ntBASIC12.78□□□□□ -0.36
RhoP15409 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC12.78□□□□□ -0.36
RhoP15409 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.78□□□□□ -0.36
RhoP15409 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RhoP15409 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RhoP15409 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.78□□□□□ -0.36
RhoP15409 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RhoP15409 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RhoP15409 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.78□□□□□ -0.36
RhoP15409 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RhoP15409 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RhoP15409 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RhoP15409 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
RhoP15409 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RhoP15409 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RhoP15409 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.78□□□□□ -0.36
RhoP15409 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RhoP15409 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
RhoP15409 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
RhoP15409 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
RhoP15409 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RhoP15409 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
RhoP15409 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.77□□□□□ -0.36
RhoP15409 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RhoP15409 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RhoP15409 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
RhoP15409 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms