Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.17□□□□□ -0.62
Ccl3P10855 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC11.17□□□□□ -0.62
Ccl3P10855 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.17□□□□□ -0.62
Ccl3P10855 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.17□□□□□ -0.62
Ccl3P10855 Mir7032-201ENSMUST00000185154 79 ntBASIC11.17□□□□□ -0.62
Ccl3P10855 Gm7467-201ENSMUST00000185173 652 ntBASIC11.17□□□□□ -0.62
Ccl3P10855 Gm37835-201ENSMUST00000193305 361 ntBASIC11.17□□□□□ -0.62
Ccl3P10855 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.17□□□□□ -0.62
Ccl3P10855 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.17□□□□□ -0.62
Ccl3P10855 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Ccl3P10855 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Ccl3P10855 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.17□□□□□ -0.62
Ccl3P10855 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.17□□□□□ -0.62
Ccl3P10855 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Ccl3P10855 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Ccl3P10855 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.16□□□□□ -0.62
Ccl3P10855 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.16□□□□□ -0.62
Ccl3P10855 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Ccl3P10855 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.16□□□□□ -0.62
Ccl3P10855 Gm11450-201ENSMUST00000121144 333 ntBASIC11.16□□□□□ -0.62
Ccl3P10855 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.16□□□□□ -0.62
Ccl3P10855 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.16□□□□□ -0.62
Ccl3P10855 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.16□□□□□ -0.62
Ccl3P10855 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Gm21027-201ENSMUST00000219300 1236 ntBASIC11.16□□□□□ -0.62
Ccl3P10855 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.16□□□□□ -0.62
Ccl3P10855 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.16□□□□□ -0.62
Ccl3P10855 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Gm9996-201ENSMUST00000070359 913 ntBASIC11.16□□□□□ -0.62
Ccl3P10855 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.16□□□□□ -0.62
Ccl3P10855 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.16□□□□□ -0.62
Ccl3P10855 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.16□□□□□ -0.62
Ccl3P10855 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.16□□□□□ -0.62
Ccl3P10855 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Ccl3P10855 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Ccl3P10855 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.16□□□□□ -0.62
Ccl3P10855 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl3P10855 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl3P10855 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl3P10855 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Ccl3P10855 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl3P10855 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Ccl3P10855 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl3P10855 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl3P10855 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.15□□□□□ -0.62
Ccl3P10855 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Ccl3P10855 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl3P10855 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl3P10855 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Ccl3P10855 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Ccl3P10855 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl3P10855 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl3P10855 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Ccl3P10855 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl3P10855 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl3P10855 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccl3P10855 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.15□□□□□ -0.62
Ccl3P10855 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.15□□□□□ -0.62
Ccl3P10855 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC11.15□□□□□ -0.62
Ccl3P10855 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
Ccl3P10855 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 105.3 ms