Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TnfP06804 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TnfP06804 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
TnfP06804 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TnfP06804 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TnfP06804 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TnfP06804 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TnfP06804 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TnfP06804 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TnfP06804 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.43□□□□□ -0.26
TnfP06804 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.43□□□□□ -0.26
TnfP06804 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.43□□□□□ -0.26
TnfP06804 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TnfP06804 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
TnfP06804 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TnfP06804 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TnfP06804 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.43□□□□□ -0.26
TnfP06804 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.43□□□□□ -0.26
TnfP06804 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TnfP06804 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TnfP06804 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC13.43□□□□□ -0.26
TnfP06804 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.43□□□□□ -0.26
TnfP06804 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.43□□□□□ -0.26
TnfP06804 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.43□□□□□ -0.26
TnfP06804 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.43□□□□□ -0.26
TnfP06804 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.43□□□□□ -0.26
TnfP06804 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.43□□□□□ -0.26
TnfP06804 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
TnfP06804 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TnfP06804 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.42□□□□□ -0.26
TnfP06804 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.42□□□□□ -0.26
TnfP06804 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TnfP06804 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
TnfP06804 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TnfP06804 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TnfP06804 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.42□□□□□ -0.26
TnfP06804 Gm2383-201ENSMUST00000181461 807 ntBASIC13.42□□□□□ -0.26
TnfP06804 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.42□□□□□ -0.26
TnfP06804 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.42□□□□□ -0.26
TnfP06804 Gm8885-201ENSMUST00000189382 598 ntBASIC13.42□□□□□ -0.26
TnfP06804 AA914427-201ENSMUST00000193194 1166 ntBASIC13.42□□□□□ -0.26
TnfP06804 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TnfP06804 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC13.42□□□□□ -0.26
TnfP06804 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TnfP06804 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.42□□□□□ -0.26
TnfP06804 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.42□□□□□ -0.26
TnfP06804 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TnfP06804 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.42□□□□□ -0.26
TnfP06804 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TnfP06804 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms