Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Gm23949-201ENSMUST00000104027 127 ntBASIC13.1□□□□□ -0.31
PrnpP04925 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
PrnpP04925 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
PrnpP04925 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
PrnpP04925 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.1□□□□□ -0.31
PrnpP04925 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.1□□□□□ -0.31
PrnpP04925 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.1□□□□□ -0.31
PrnpP04925 Gm5616-201ENSMUST00000165252 384 ntBASIC13.1□□□□□ -0.31
PrnpP04925 Gm8741-201ENSMUST00000174736 384 ntBASIC13.1□□□□□ -0.31
PrnpP04925 Gm5732-201ENSMUST00000182596 1007 ntBASIC13.1□□□□□ -0.31
PrnpP04925 Gm18304-201ENSMUST00000189162 546 ntBASIC13.1□□□□□ -0.31
PrnpP04925 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.1□□□□□ -0.31
PrnpP04925 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
PrnpP04925 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
PrnpP04925 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.1□□□□□ -0.31
PrnpP04925 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
PrnpP04925 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.1□□□□□ -0.31
PrnpP04925 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
PrnpP04925 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
PrnpP04925 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.1□□□□□ -0.31
PrnpP04925 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
PrnpP04925 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.09□□□□□ -0.31
PrnpP04925 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Gm6335-201ENSMUST00000118081 1194 ntBASIC13.09□□□□□ -0.31
PrnpP04925 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.09□□□□□ -0.31
PrnpP04925 Gm15711-201ENSMUST00000118889 535 ntBASIC13.09□□□□□ -0.31
PrnpP04925 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.09□□□□□ -0.31
PrnpP04925 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.09□□□□□ -0.31
PrnpP04925 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.09□□□□□ -0.31
PrnpP04925 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.09□□□□□ -0.31
PrnpP04925 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.09□□□□□ -0.31
PrnpP04925 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Gm9550-201ENSMUST00000161130 862 ntBASIC13.09□□□□□ -0.31
PrnpP04925 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.09□□□□□ -0.31
PrnpP04925 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.09□□□□□ -0.31
PrnpP04925 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.09□□□□□ -0.31
PrnpP04925 Gm18393-201ENSMUST00000208349 1131 ntBASIC13.09□□□□□ -0.31
PrnpP04925 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.09□□□□□ -0.31
PrnpP04925 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.09□□□□□ -0.31
PrnpP04925 AC154252.2-201ENSMUST00000223593 767 ntBASIC13.09□□□□□ -0.31
PrnpP04925 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.09□□□□□ -0.31
PrnpP04925 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
PrnpP04925 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
PrnpP04925 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
PrnpP04925 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
PrnpP04925 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.09□□□□□ -0.31
PrnpP04925 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
PrnpP04925 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PrnpP04925 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
PrnpP04925 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.31
PrnpP04925 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
PrnpP04925 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
PrnpP04925 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PrnpP04925 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PrnpP04925 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PrnpP04925 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PrnpP04925 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PrnpP04925 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PrnpP04925 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms