Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.32□□□□□ -0.76
P04212 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.32□□□□□ -0.76
P04212 Gm10576-201ENSMUST00000191927 825 ntBASIC10.32□□□□□ -0.76
P04212 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
P04212 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
P04212 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.32□□□□□ -0.76
P04212 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04212 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
P04212 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04212 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
P04212 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04212 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
P04212 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04212 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
P04212 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04212 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04212 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.32□□□□□ -0.76
P04212 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04212 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
P04212 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
P04212 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
P04212 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
P04212 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.31□□□□□ -0.76
P04212 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.31□□□□□ -0.76
P04212 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Gm38049-201ENSMUST00000195698 1372 ntBASIC10.31□□□□□ -0.76
P04212 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
P04212 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
P04212 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.31□□□□□ -0.76
P04212 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
P04212 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Gm28693-202ENSMUST00000190758 331 ntBASIC10.31□□□□□ -0.76
P04212 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.31□□□□□ -0.76
P04212 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
P04212 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.31□□□□□ -0.76
P04212 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.31□□□□□ -0.76
P04212 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.31□□□□□ -0.76
P04212 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
P04212 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
P04212 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
P04212 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
P04212 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
P04212 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
P04212 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
P04212 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC10.31□□□□□ -0.76
P04212 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
P04212 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
P04212 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
P04212 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
P04212 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
P04212 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
P04212 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
P04212 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.3□□□□□ -0.76
P04212 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
P04212 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
P04212 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
P04212 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
P04212 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
P04212 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
P04212 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
P04212 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
P04212 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
P04212 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
P04212 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
P04212 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
P04212 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.3□□□□□ -0.76
P04212 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
P04212 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.3□□□□□ -0.76
P04212 Gm12539-201ENSMUST00000121549 1098 ntBASIC10.3□□□□□ -0.76
P04212 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC10.3□□□□□ -0.76
P04212 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
P04212 Gm27701-201ENSMUST00000184498 110 ntBASIC10.3□□□□□ -0.76
P04212 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms