Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
H3f3cP02301 Gm19163-201ENSMUST00000223313 780 ntBASIC10.92□□□□□ -0.66
H3f3cP02301 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H3f3cP02301 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H3f3cP02301 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H3f3cP02301 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H3f3cP02301 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H3f3cP02301 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
H3f3cP02301 Gm9396-201ENSMUST00000076703 567 ntBASIC10.92□□□□□ -0.66
H3f3cP02301 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
H3f3cP02301 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC10.92□□□□□ -0.66
H3f3cP02301 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.92□□□□□ -0.66
H3f3cP02301 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
H3f3cP02301 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
H3f3cP02301 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
H3f3cP02301 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
H3f3cP02301 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.92□□□□□ -0.66
H3f3cP02301 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H3f3cP02301 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
H3f3cP02301 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H3f3cP02301 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H3f3cP02301 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.92□□□□□ -0.66
H3f3cP02301 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H3f3cP02301 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H3f3cP02301 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
H3f3cP02301 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC10.92□□□□□ -0.66
H3f3cP02301 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
H3f3cP02301 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
H3f3cP02301 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
H3f3cP02301 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
H3f3cP02301 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.91□□□□□ -0.66
H3f3cP02301 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
H3f3cP02301 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
H3f3cP02301 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
H3f3cP02301 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
H3f3cP02301 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3cP02301 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3cP02301 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC10.91□□□□□ -0.66
H3f3cP02301 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.91□□□□□ -0.66
H3f3cP02301 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3cP02301 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
H3f3cP02301 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3cP02301 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.91□□□□□ -0.66
H3f3cP02301 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
H3f3cP02301 Gm17208-201ENSMUST00000168388 535 ntBASIC10.91□□□□□ -0.66
H3f3cP02301 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC10.91□□□□□ -0.66
H3f3cP02301 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
H3f3cP02301 Gm8099-201ENSMUST00000200510 742 ntBASIC10.91□□□□□ -0.66
H3f3cP02301 Gm18062-201ENSMUST00000208020 547 ntBASIC10.91□□□□□ -0.66
H3f3cP02301 Gm18055-201ENSMUST00000208254 547 ntBASIC10.91□□□□□ -0.66
H3f3cP02301 AC166051.1-201ENSMUST00000214313 210 ntBASIC10.91□□□□□ -0.66
H3f3cP02301 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.91□□□□□ -0.66
H3f3cP02301 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.91□□□□□ -0.66
H3f3cP02301 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.91□□□□□ -0.66
H3f3cP02301 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.91□□□□□ -0.66
H3f3cP02301 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
H3f3cP02301 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3cP02301 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3cP02301 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3cP02301 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
H3f3cP02301 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.91□□□□□ -0.66
H3f3cP02301 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.91□□□□□ -0.66
H3f3cP02301 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3cP02301 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3cP02301 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3cP02301 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3cP02301 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3cP02301 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3cP02301 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
H3f3cP02301 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
H3f3cP02301 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC10.9□□□□□ -0.66
H3f3cP02301 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.9□□□□□ -0.66
H3f3cP02301 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.9□□□□□ -0.66
H3f3cP02301 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
H3f3cP02301 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3cP02301 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3cP02301 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3cP02301 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
H3f3cP02301 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.9□□□□□ -0.66
H3f3cP02301 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3cP02301 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
H3f3cP02301 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3cP02301 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3cP02301 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3cP02301 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3cP02301 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
H3f3cP02301 Snord83b-201ENSMUST00000104546 94 ntBASIC10.9□□□□□ -0.66
H3f3cP02301 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3cP02301 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
H3f3cP02301 Gm14921-201ENSMUST00000118643 908 ntBASIC10.9□□□□□ -0.66
H3f3cP02301 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.9□□□□□ -0.66
H3f3cP02301 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.9□□□□□ -0.66
H3f3cP02301 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.9□□□□□ -0.66
H3f3cP02301 Snora78-201ENSMUST00000158630 128 ntBASIC10.9□□□□□ -0.66
H3f3cP02301 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC10.9□□□□□ -0.66
H3f3cP02301 Gm5896-201ENSMUST00000189662 1024 ntBASIC10.9□□□□□ -0.66
H3f3cP02301 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3cP02301 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3cP02301 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3f3cP02301 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms