Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Gm23363-201ENSMUST00000175024 79 ntBASIC11.62□□□□□ -0.55
P01852 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.62□□□□□ -0.55
P01852 Gm32025-201ENSMUST00000217960 307 ntBASIC11.62□□□□□ -0.55
P01852 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01852 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.62□□□□□ -0.55
P01852 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.62□□□□□ -0.55
P01852 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01852 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
P01852 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01852 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01852 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
P01852 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
P01852 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
P01852 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.62□□□□□ -0.55
P01852 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
P01852 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01852 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01852 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01852 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.62□□□□□ -0.55
P01852 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01852 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
P01852 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
P01852 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
P01852 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.62□□□□□ -0.55
P01852 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P01852 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P01852 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P01852 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P01852 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
P01852 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P01852 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
P01852 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P01852 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P01852 Gm22018-201ENSMUST00000104357 131 ntBASIC11.61□□□□□ -0.55
P01852 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P01852 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
P01852 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.61□□□□□ -0.55
P01852 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.61□□□□□ -0.55
P01852 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
P01852 Gm27572-201ENSMUST00000183702 255 ntBASIC11.61□□□□□ -0.55
P01852 Gm38002-201ENSMUST00000193255 180 ntBASIC11.61□□□□□ -0.55
P01852 Gm18584-201ENSMUST00000203098 964 ntBASIC11.61□□□□□ -0.55
P01852 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.61□□□□□ -0.55
P01852 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.61□□□□□ -0.55
P01852 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.61□□□□□ -0.55
P01852 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P01852 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P01852 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC11.61□□□□□ -0.55
P01852 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
P01852 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
P01852 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P01852 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P01852 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P01852 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
P01852 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.61□□□□□ -0.55
P01852 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P01852 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.61□□□□□ -0.55
P01852 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P01852 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.61□□□□□ -0.55
P01852 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.61□□□□□ -0.55
P01852 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
P01852 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
P01852 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.6□□□□□ -0.55
P01852 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
P01852 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
P01852 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
P01852 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
P01852 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
P01852 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.6□□□□□ -0.55
P01852 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.6□□□□□ -0.55
P01852 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.6□□□□□ -0.55
P01852 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
P01852 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.6□□□□□ -0.55
P01852 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.6□□□□□ -0.55
P01852 Gm7809-201ENSMUST00000153199 742 ntBASIC11.6□□□□□ -0.55
P01852 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
P01852 Gm6222-202ENSMUST00000182143 629 ntBASIC11.6□□□□□ -0.55
P01852 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms