Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Ifna1P01572 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Ifna1P01572 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Ifna1P01572 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.69□□□□□ -0.7
Ifna1P01572 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.69□□□□□ -0.7
Ifna1P01572 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ifna1P01572 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ifna1P01572 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Ifna1P01572 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ifna1P01572 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Ifna1P01572 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Ifna1P01572 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Ifna1P01572 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ifna1P01572 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ifna1P01572 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.69□□□□□ -0.7
Ifna1P01572 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Ifna1P01572 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ifna1P01572 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ifna1P01572 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.69□□□□□ -0.7
Ifna1P01572 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ifna1P01572 Gm16202-201ENSMUST00000117532 544 ntBASIC10.69□□□□□ -0.7
Ifna1P01572 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.69□□□□□ -0.7
Ifna1P01572 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.69□□□□□ -0.7
Ifna1P01572 Gm9630-201ENSMUST00000178304 885 ntBASIC10.69□□□□□ -0.7
Ifna1P01572 Gm9061-201ENSMUST00000182707 1006 ntBASIC10.69□□□□□ -0.7
Ifna1P01572 Gm27838-201ENSMUST00000184829 128 ntBASIC10.69□□□□□ -0.7
Ifna1P01572 Gm19184-201ENSMUST00000196798 928 ntBASIC10.69□□□□□ -0.7
Ifna1P01572 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
Ifna1P01572 AC122305.4-201ENSMUST00000216159 1206 ntBASIC10.69□□□□□ -0.7
Ifna1P01572 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.69□□□□□ -0.7
Ifna1P01572 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ifna1P01572 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ifna1P01572 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ifna1P01572 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ifna1P01572 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ifna1P01572 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.69□□□□□ -0.7
Ifna1P01572 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ifna1P01572 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Ifna1P01572 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Ifna1P01572 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Ifna1P01572 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ifna1P01572 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ifna1P01572 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ifna1P01572 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Ifna1P01572 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.69□□□□□ -0.7
Ifna1P01572 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC10.68□□□□□ -0.7
Ifna1P01572 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Ifna1P01572 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.68□□□□□ -0.7
Ifna1P01572 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.68□□□□□ -0.7
Ifna1P01572 Gm13689-201ENSMUST00000119360 685 ntBASIC10.68□□□□□ -0.7
Ifna1P01572 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.68□□□□□ -0.7
Ifna1P01572 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Gm5354-201ENSMUST00000182417 973 ntBASIC10.68□□□□□ -0.7
Ifna1P01572 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.68□□□□□ -0.7
Ifna1P01572 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.68□□□□□ -0.7
Ifna1P01572 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ifna1P01572 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Ifna1P01572 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC10.68□□□□□ -0.7
Ifna1P01572 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.68□□□□□ -0.7
Ifna1P01572 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Ifna1P01572 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.68□□□□□ -0.7
Ifna1P01572 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.68□□□□□ -0.7
Ifna1P01572 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.68□□□□□ -0.7
Ifna1P01572 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Ifna1P01572 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.67□□□□□ -0.7
Ifna1P01572 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ifna1P01572 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ifna1P01572 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ifna1P01572 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ifna1P01572 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.67□□□□□ -0.7
Ifna1P01572 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ifna1P01572 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.67□□□□□ -0.7
Ifna1P01572 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ifna1P01572 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms