Protein–RNA interactions for Protein: O88974

Setdb1, Histone-lysine N-methyltransferase SETDB1, mousemouse

Predictions only

Length 1,307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Setdb1O88974 Gm37827-201ENSMUST00000194486 1542 ntBASIC15.49■□□□□ 0.07
Setdb1O88974 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Setdb1O88974 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Setdb1O88974 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Setdb1O88974 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Setdb1O88974 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Setdb1O88974 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC15.48■□□□□ 0.07
Setdb1O88974 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Setdb1O88974 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Setdb1O88974 Gm12266-201ENSMUST00000120311 962 ntBASIC15.48■□□□□ 0.07
Setdb1O88974 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC15.48■□□□□ 0.07
Setdb1O88974 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Setdb1O88974 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC15.48■□□□□ 0.07
Setdb1O88974 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC15.48■□□□□ 0.07
Setdb1O88974 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.48■□□□□ 0.07
Setdb1O88974 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Setdb1O88974 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC15.48■□□□□ 0.07
Setdb1O88974 Gm7600-201ENSMUST00000209657 785 ntBASIC15.48■□□□□ 0.07
Setdb1O88974 AC159819.2-201ENSMUST00000216151 342 ntBASIC15.48■□□□□ 0.07
Setdb1O88974 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Setdb1O88974 AC154849.4-201ENSMUST00000224868 365 ntBASIC15.48■□□□□ 0.07
Setdb1O88974 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Setdb1O88974 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Setdb1O88974 Ntng1-201ENSMUST00000051253 327 ntBASIC15.48■□□□□ 0.07
Setdb1O88974 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Setdb1O88974 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Setdb1O88974 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Setdb1O88974 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC15.48■□□□□ 0.07
Setdb1O88974 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Setdb1O88974 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Setdb1O88974 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.48■□□□□ 0.07
Setdb1O88974 Acot6-202ENSMUST00000222921 3622 ntBASIC15.48■□□□□ 0.07
Setdb1O88974 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Setdb1O88974 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Setdb1O88974 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Setdb1O88974 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Setdb1O88974 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Setdb1O88974 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Setdb1O88974 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC15.48■□□□□ 0.07
Setdb1O88974 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Setdb1O88974 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Setdb1O88974 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Setdb1O88974 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Setdb1O88974 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Setdb1O88974 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC15.47■□□□□ 0.07
Setdb1O88974 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC15.47■□□□□ 0.07
Setdb1O88974 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.47■□□□□ 0.07
Setdb1O88974 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC15.47■□□□□ 0.07
Setdb1O88974 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC15.47■□□□□ 0.07
Setdb1O88974 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Setdb1O88974 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Setdb1O88974 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Setdb1O88974 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC15.47■□□□□ 0.07
Setdb1O88974 AC166095.1-201ENSMUST00000223731 1241 ntBASIC15.47■□□□□ 0.07
Setdb1O88974 CT025551.1-201ENSMUST00000223996 692 ntBASIC15.47■□□□□ 0.07
Setdb1O88974 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Setdb1O88974 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Setdb1O88974 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Setdb1O88974 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Setdb1O88974 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Setdb1O88974 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Setdb1O88974 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Setdb1O88974 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.47■□□□□ 0.07
Setdb1O88974 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Setdb1O88974 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Setdb1O88974 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Setdb1O88974 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Setdb1O88974 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
Setdb1O88974 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Setdb1O88974 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Setdb1O88974 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Setdb1O88974 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Setdb1O88974 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC15.47■□□□□ 0.07
Setdb1O88974 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Setdb1O88974 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Setdb1O88974 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Setdb1O88974 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Setdb1O88974 Gm11675-201ENSMUST00000121873 832 ntBASIC15.46■□□□□ 0.07
Setdb1O88974 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Setdb1O88974 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Setdb1O88974 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.46■□□□□ 0.07
Setdb1O88974 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.46■□□□□ 0.07
Setdb1O88974 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC15.46■□□□□ 0.07
Setdb1O88974 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC15.46■□□□□ 0.07
Setdb1O88974 Gm5904-201ENSMUST00000210286 865 ntBASIC15.46■□□□□ 0.07
Setdb1O88974 AC107638.1-201ENSMUST00000213690 1061 ntBASIC15.46■□□□□ 0.07
Setdb1O88974 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Setdb1O88974 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Setdb1O88974 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Setdb1O88974 Gm22058-201ENSMUST00000083393 310 ntBASIC15.46■□□□□ 0.07
Setdb1O88974 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.46■□□□□ 0.07
Setdb1O88974 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Setdb1O88974 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Setdb1O88974 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Setdb1O88974 Daam2-202ENSMUST00000224595 1926 ntBASIC15.46■□□□□ 0.07
Setdb1O88974 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Setdb1O88974 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Setdb1O88974 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Setdb1O88974 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC15.46■□□□□ 0.07
Setdb1O88974 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms