Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Cops4O88544 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.71□□□□□ -0.53
Cops4O88544 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.71□□□□□ -0.53
Cops4O88544 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Cops4O88544 Gm24694-201ENSMUST00000180054 110 ntBASIC11.71□□□□□ -0.53
Cops4O88544 Gm27663-201ENSMUST00000184839 110 ntBASIC11.71□□□□□ -0.53
Cops4O88544 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.71□□□□□ -0.53
Cops4O88544 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.71□□□□□ -0.53
Cops4O88544 Gm19184-201ENSMUST00000196798 928 ntBASIC11.71□□□□□ -0.53
Cops4O88544 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.71□□□□□ -0.53
Cops4O88544 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cops4O88544 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cops4O88544 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cops4O88544 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cops4O88544 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cops4O88544 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cops4O88544 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Cops4O88544 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Cops4O88544 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.71□□□□□ -0.54
Cops4O88544 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.7□□□□□ -0.54
Cops4O88544 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cops4O88544 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cops4O88544 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cops4O88544 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.7□□□□□ -0.54
Cops4O88544 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cops4O88544 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cops4O88544 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cops4O88544 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cops4O88544 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.7□□□□□ -0.54
Cops4O88544 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.7□□□□□ -0.54
Cops4O88544 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Cops4O88544 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Cops4O88544 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cops4O88544 Mir7023-201ENSMUST00000185093 64 ntBASIC11.7□□□□□ -0.54
Cops4O88544 Gm43094-201ENSMUST00000196549 921 ntBASIC11.7□□□□□ -0.54
Cops4O88544 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.7□□□□□ -0.54
Cops4O88544 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.7□□□□□ -0.54
Cops4O88544 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Cops4O88544 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Cops4O88544 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
Cops4O88544 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.7□□□□□ -0.54
Cops4O88544 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.7□□□□□ -0.54
Cops4O88544 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cops4O88544 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.7□□□□□ -0.54
Cops4O88544 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Cops4O88544 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Cops4O88544 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Cops4O88544 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cops4O88544 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.69□□□□□ -0.54
Cops4O88544 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Cops4O88544 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.69□□□□□ -0.54
Cops4O88544 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Cops4O88544 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Cops4O88544 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Cops4O88544 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms