Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.56□□□□□ -0.4
Pdlim1O70400 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Pdlim1O70400 Gm6023-201ENSMUST00000118217 606 ntBASIC12.56□□□□□ -0.4
Pdlim1O70400 Gm11964-201ENSMUST00000120982 444 ntBASIC12.56□□□□□ -0.4
Pdlim1O70400 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pdlim1O70400 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Gm8018-201ENSMUST00000173536 789 ntBASIC12.56□□□□□ -0.4
Pdlim1O70400 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.56□□□□□ -0.4
Pdlim1O70400 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.56□□□□□ -0.4
Pdlim1O70400 Gm18054-201ENSMUST00000207539 555 ntBASIC12.56□□□□□ -0.4
Pdlim1O70400 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.56□□□□□ -0.4
Pdlim1O70400 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.56□□□□□ -0.4
Pdlim1O70400 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.56□□□□□ -0.4
Pdlim1O70400 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Pdlim1O70400 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Pdlim1O70400 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Pdlim1O70400 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pdlim1O70400 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pdlim1O70400 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.56□□□□□ -0.4
Pdlim1O70400 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pdlim1O70400 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pdlim1O70400 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.56□□□□□ -0.4
Pdlim1O70400 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pdlim1O70400 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.55□□□□□ -0.4
Pdlim1O70400 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pdlim1O70400 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pdlim1O70400 Gm10434-201ENSMUST00000101158 471 ntBASIC12.55□□□□□ -0.4
Pdlim1O70400 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.55□□□□□ -0.4
Pdlim1O70400 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.55□□□□□ -0.4
Pdlim1O70400 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 Gm6013-201ENSMUST00000212264 699 ntBASIC12.55□□□□□ -0.4
Pdlim1O70400 Gm45925-201ENSMUST00000218882 744 ntBASIC12.55□□□□□ -0.4
Pdlim1O70400 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pdlim1O70400 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pdlim1O70400 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Pdlim1O70400 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.55□□□□□ -0.4
Pdlim1O70400 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pdlim1O70400 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.55□□□□□ -0.4
Pdlim1O70400 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.55□□□□□ -0.4
Pdlim1O70400 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pdlim1O70400 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.54□□□□□ -0.4
Pdlim1O70400 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Pdlim1O70400 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Pdlim1O70400 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms