Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Gm6447-201ENSMUST00000118905 835 ntBASIC11.78□□□□□ -0.52
BckdkO55028 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Gm13123-201ENSMUST00000122173 492 ntBASIC11.78□□□□□ -0.52
BckdkO55028 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.78□□□□□ -0.52
BckdkO55028 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.78□□□□□ -0.52
BckdkO55028 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.78□□□□□ -0.52
BckdkO55028 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Gm19309-201ENSMUST00000218295 205 ntBASIC11.78□□□□□ -0.52
BckdkO55028 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.78□□□□□ -0.52
BckdkO55028 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.78□□□□□ -0.52
BckdkO55028 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.78□□□□□ -0.52
BckdkO55028 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
BckdkO55028 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Snora73a-201ENSMUST00000082453 205 ntBASIC11.78□□□□□ -0.52
BckdkO55028 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.78□□□□□ -0.52
BckdkO55028 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
BckdkO55028 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
BckdkO55028 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.52
BckdkO55028 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
BckdkO55028 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
BckdkO55028 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.77□□□□□ -0.52
BckdkO55028 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
BckdkO55028 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
BckdkO55028 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
BckdkO55028 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
BckdkO55028 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
BckdkO55028 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.77□□□□□ -0.53
BckdkO55028 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.77□□□□□ -0.53
BckdkO55028 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 Mir686-201ENSMUST00000102174 109 ntBASIC11.77□□□□□ -0.53
BckdkO55028 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.77□□□□□ -0.53
BckdkO55028 Gm16379-201ENSMUST00000161469 348 ntBASIC11.77□□□□□ -0.53
BckdkO55028 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.77□□□□□ -0.53
BckdkO55028 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.77□□□□□ -0.53
BckdkO55028 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.77□□□□□ -0.53
BckdkO55028 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 Gm8762-201ENSMUST00000193486 339 ntBASIC11.77□□□□□ -0.53
BckdkO55028 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.77□□□□□ -0.53
BckdkO55028 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC11.77□□□□□ -0.53
BckdkO55028 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.77□□□□□ -0.53
BckdkO55028 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
BckdkO55028 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.77□□□□□ -0.53
BckdkO55028 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
BckdkO55028 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BckdkO55028 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BckdkO55028 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
BckdkO55028 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BckdkO55028 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
BckdkO55028 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BckdkO55028 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
BckdkO55028 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BckdkO55028 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
BckdkO55028 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
BckdkO55028 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BckdkO55028 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.76□□□□□ -0.53
BckdkO55028 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
BckdkO55028 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
BckdkO55028 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BckdkO55028 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
BckdkO55028 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
BckdkO55028 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms