Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.49□□□□□ -0.57
Rnf13O54965 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rnf13O54965 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.49□□□□□ -0.57
Rnf13O54965 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.49□□□□□ -0.57
Rnf13O54965 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.49□□□□□ -0.57
Rnf13O54965 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rnf13O54965 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.49□□□□□ -0.57
Rnf13O54965 Gm44397-201ENSMUST00000195950 113 ntBASIC11.49□□□□□ -0.57
Rnf13O54965 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.49□□□□□ -0.57
Rnf13O54965 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.49□□□□□ -0.57
Rnf13O54965 Gm6983-201ENSMUST00000214912 628 ntBASIC11.49□□□□□ -0.57
Rnf13O54965 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.49□□□□□ -0.57
Rnf13O54965 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.49□□□□□ -0.57
Rnf13O54965 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Rnf13O54965 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rnf13O54965 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Rnf13O54965 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.49□□□□□ -0.57
Rnf13O54965 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.49□□□□□ -0.57
Rnf13O54965 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.49□□□□□ -0.57
Rnf13O54965 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.49□□□□□ -0.57
Rnf13O54965 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Rnf13O54965 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Rnf13O54965 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Rnf13O54965 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.48□□□□□ -0.57
Rnf13O54965 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Rnf13O54965 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.48□□□□□ -0.57
Rnf13O54965 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
Rnf13O54965 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 Gm5687-201ENSMUST00000118252 640 ntBASIC11.48□□□□□ -0.57
Rnf13O54965 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.48□□□□□ -0.57
Rnf13O54965 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.48□□□□□ -0.57
Rnf13O54965 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.48□□□□□ -0.57
Rnf13O54965 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.48□□□□□ -0.57
Rnf13O54965 Gm20949-201ENSMUST00000206478 952 ntBASIC11.48□□□□□ -0.57
Rnf13O54965 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC11.48□□□□□ -0.57
Rnf13O54965 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.48□□□□□ -0.57
Rnf13O54965 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 Gm26035-201ENSMUST00000083065 308 ntBASIC11.48□□□□□ -0.57
Rnf13O54965 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.48□□□□□ -0.57
Rnf13O54965 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.48□□□□□ -0.57
Rnf13O54965 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.48□□□□□ -0.57
Rnf13O54965 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.48□□□□□ -0.57
Rnf13O54965 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.48□□□□□ -0.57
Rnf13O54965 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf13O54965 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Rnf13O54965 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rnf13O54965 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.47□□□□□ -0.57
Rnf13O54965 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.47□□□□□ -0.57
Rnf13O54965 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.47□□□□□ -0.57
Rnf13O54965 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf13O54965 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms