Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smarce1O54941 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Smarce1O54941 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Smarce1O54941 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smarce1O54941 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Smarce1O54941 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Smarce1O54941 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Smarce1O54941 Gm8805-201ENSMUST00000117848 313 ntBASIC15.05■□□□□ -0
Smarce1O54941 Gm10156-201ENSMUST00000122364 462 ntBASIC15.05■□□□□ -0
Smarce1O54941 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.05■□□□□ -0
Smarce1O54941 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smarce1O54941 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.05■□□□□ -0
Smarce1O54941 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.05■□□□□ -0
Smarce1O54941 AC132317.1-201ENSMUST00000227227 962 ntBASIC15.05■□□□□ -0
Smarce1O54941 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarce1O54941 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarce1O54941 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smarce1O54941 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smarce1O54941 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Smarce1O54941 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarce1O54941 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC15.05■□□□□ -0
Smarce1O54941 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Smarce1O54941 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Smarce1O54941 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Smarce1O54941 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Smarce1O54941 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Smarce1O54941 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarce1O54941 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarce1O54941 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarce1O54941 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
Smarce1O54941 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarce1O54941 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.04■□□□□ -0
Smarce1O54941 Gm26185-201ENSMUST00000157692 266 ntBASIC15.04■□□□□ -0
Smarce1O54941 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
Smarce1O54941 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarce1O54941 Gm22121-201ENSMUST00000175148 54 ntBASIC15.04■□□□□ -0
Smarce1O54941 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarce1O54941 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC15.04■□□□□ -0
Smarce1O54941 Gm9124-201ENSMUST00000191789 1092 ntBASIC15.04■□□□□ -0
Smarce1O54941 Gm9113-201ENSMUST00000192510 1018 ntBASIC15.04■□□□□ -0
Smarce1O54941 Gm9131-201ENSMUST00000193557 1089 ntBASIC15.04■□□□□ -0
Smarce1O54941 Gm9121-201ENSMUST00000193749 1071 ntBASIC15.04■□□□□ -0
Smarce1O54941 Gm18018-201ENSMUST00000198273 408 ntBASIC15.04■□□□□ -0
Smarce1O54941 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarce1O54941 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.04■□□□□ -0
Smarce1O54941 Gm7287-201ENSMUST00000205267 602 ntBASIC15.04■□□□□ -0
Smarce1O54941 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarce1O54941 Gm44772-201ENSMUST00000207623 1191 ntBASIC15.04■□□□□ -0
Smarce1O54941 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.04■□□□□ -0
Smarce1O54941 Gm8598-201ENSMUST00000221184 836 ntBASIC15.04■□□□□ -0
Smarce1O54941 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarce1O54941 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarce1O54941 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarce1O54941 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarce1O54941 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarce1O54941 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.04■□□□□ -0
Smarce1O54941 Nudt18-202ENSMUST00000228554 3619 ntBASIC15.04■□□□□ -0
Smarce1O54941 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarce1O54941 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarce1O54941 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC15.04■□□□□ -0
Smarce1O54941 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC15.04■□□□□ -0
Smarce1O54941 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Smarce1O54941 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Smarce1O54941 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Smarce1O54941 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Smarce1O54941 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 Matn2-203ENSMUST00000226766 3252 ntBASIC15.03■□□□□ -0
Smarce1O54941 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 Gm2231-201ENSMUST00000125661 612 ntBASIC15.03■□□□□ -0
Smarce1O54941 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC15.03■□□□□ -0
Smarce1O54941 Proscos-202ENSMUST00000178990 666 ntBASIC15.03■□□□□ -0
Smarce1O54941 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.03■□□□□ -0
Smarce1O54941 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.03■□□□□ -0
Smarce1O54941 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.03■□□□□ -0
Smarce1O54941 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Smarce1O54941 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Smarce1O54941 Gm14608-201ENSMUST00000120030 1553 ntBASIC15.02■□□□□ -0
Smarce1O54941 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Smarce1O54941 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Smarce1O54941 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms