Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Npc1O35604 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Gm15198-201ENSMUST00000117283 177 ntBASIC12.39□□□□□ -0.43
Npc1O35604 Gm13492-201ENSMUST00000119772 665 ntBASIC12.39□□□□□ -0.43
Npc1O35604 Gm14704-201ENSMUST00000120300 874 ntBASIC12.39□□□□□ -0.43
Npc1O35604 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.39□□□□□ -0.43
Npc1O35604 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
Npc1O35604 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.39□□□□□ -0.43
Npc1O35604 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.39□□□□□ -0.43
Npc1O35604 Gm6222-202ENSMUST00000182143 629 ntBASIC12.39□□□□□ -0.43
Npc1O35604 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC12.39□□□□□ -0.43
Npc1O35604 Gm3961-201ENSMUST00000204425 994 ntBASIC12.39□□□□□ -0.43
Npc1O35604 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.39□□□□□ -0.43
Npc1O35604 Gm32025-201ENSMUST00000217960 307 ntBASIC12.39□□□□□ -0.43
Npc1O35604 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.39□□□□□ -0.43
Npc1O35604 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Npc1O35604 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.39□□□□□ -0.43
Npc1O35604 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Npc1O35604 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Npc1O35604 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Npc1O35604 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Npc1O35604 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Npc1O35604 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.39□□□□□ -0.43
Npc1O35604 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.39□□□□□ -0.43
Npc1O35604 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Npc1O35604 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.38□□□□□ -0.43
Npc1O35604 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npc1O35604 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npc1O35604 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.38□□□□□ -0.43
Npc1O35604 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.38□□□□□ -0.43
Npc1O35604 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npc1O35604 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Npc1O35604 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npc1O35604 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Npc1O35604 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npc1O35604 Gm10434-201ENSMUST00000101158 471 ntBASIC12.38□□□□□ -0.43
Npc1O35604 Gm13786-201ENSMUST00000122371 333 ntBASIC12.38□□□□□ -0.43
Npc1O35604 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.38□□□□□ -0.43
Npc1O35604 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.38□□□□□ -0.43
Npc1O35604 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npc1O35604 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Npc1O35604 Gm29396-201ENSMUST00000185659 716 ntBASIC12.38□□□□□ -0.43
Npc1O35604 Gm43179-201ENSMUST00000198797 275 ntBASIC12.38□□□□□ -0.43
Npc1O35604 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Npc1O35604 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.38□□□□□ -0.43
Npc1O35604 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.38□□□□□ -0.43
Npc1O35604 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.38□□□□□ -0.43
Npc1O35604 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npc1O35604 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npc1O35604 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Npc1O35604 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Npc1O35604 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Npc1O35604 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npc1O35604 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.38□□□□□ -0.43
Npc1O35604 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Npc1O35604 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npc1O35604 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Npc1O35604 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npc1O35604 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npc1O35604 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Npc1O35604 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.37□□□□□ -0.43
Npc1O35604 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npc1O35604 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npc1O35604 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npc1O35604 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Npc1O35604 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Npc1O35604 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npc1O35604 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npc1O35604 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npc1O35604 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npc1O35604 Snord83b-201ENSMUST00000104546 94 ntBASIC12.37□□□□□ -0.43
Npc1O35604 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Npc1O35604 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Npc1O35604 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.37□□□□□ -0.43
Npc1O35604 Mospd4-201ENSMUST00000180618 576 ntBASIC12.37□□□□□ -0.43
Npc1O35604 Gm27501-201ENSMUST00000183599 107 ntBASIC12.37□□□□□ -0.43
Npc1O35604 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npc1O35604 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Npc1O35604 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.37□□□□□ -0.43
Npc1O35604 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npc1O35604 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Npc1O35604 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.37□□□□□ -0.43
Npc1O35604 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms