Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh9F8VPK8 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Pcdh9F8VPK8 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Gm11478-201ENSMUST00000117851 599 ntBASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Gm11424-201ENSMUST00000121929 829 ntBASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Gm2231-201ENSMUST00000125661 612 ntBASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Gm17208-201ENSMUST00000168388 535 ntBASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Gm37497-201ENSMUST00000195830 798 ntBASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh9F8VPK8 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Gm15703-201ENSMUST00000120250 880 ntBASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Gm26185-201ENSMUST00000157692 266 ntBASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Gm8810-201ENSMUST00000172895 754 ntBASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdh9F8VPK8 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdh9F8VPK8 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms