Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Gm27023-201ENSMUST00000182372 285 ntBASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Pcdhb9E9Q5G2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Gm31256-201ENSMUST00000194705 506 ntBASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Pcdhb9E9Q5G2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Gm14381-201ENSMUST00000122105 414 ntBASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Gm27243-201ENSMUST00000183964 521 ntBASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Gm8712-201ENSMUST00000221090 701 ntBASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.87□□□□□ -0.03
Pcdhb9E9Q5G2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Pcdhb9E9Q5G2 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms