Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC17.42■□□□□ 0.38
Scaf11E9PZM7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC17.41■□□□□ 0.38
Scaf11E9PZM7 AC122314.1-201ENSMUST00000223056 2239 ntBASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Gm15725-201ENSMUST00000119947 1090 ntBASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Gm5100-201ENSMUST00000195631 589 ntBASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Scaf11E9PZM7 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Gm11470-201ENSMUST00000118868 1475 ntBASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Scaf11E9PZM7 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Scaf11E9PZM7 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Scaf11E9PZM7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Scaf11E9PZM7 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scaf11E9PZM7 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scaf11E9PZM7 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scaf11E9PZM7 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scaf11E9PZM7 Gm13916-201ENSMUST00000117368 628 ntBASIC17.39■□□□□ 0.37
Scaf11E9PZM7 Gm13549-201ENSMUST00000118339 796 ntBASIC17.39■□□□□ 0.37
Scaf11E9PZM7 Rprl1-201ENSMUST00000158050 327 ntBASIC17.39■□□□□ 0.37
Scaf11E9PZM7 Gm2875-201ENSMUST00000211333 360 ntBASIC17.39■□□□□ 0.37
Scaf11E9PZM7 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Scaf11E9PZM7 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scaf11E9PZM7 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC17.39■□□□□ 0.37
Scaf11E9PZM7 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scaf11E9PZM7 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Scaf11E9PZM7 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scaf11E9PZM7 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scaf11E9PZM7 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Scaf11E9PZM7 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scaf11E9PZM7 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scaf11E9PZM7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Scaf11E9PZM7 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scaf11E9PZM7 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Scaf11E9PZM7 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Scaf11E9PZM7 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scaf11E9PZM7 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC17.38■□□□□ 0.37
Scaf11E9PZM7 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC17.38■□□□□ 0.37
Scaf11E9PZM7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scaf11E9PZM7 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Scaf11E9PZM7 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC17.38■□□□□ 0.37
Scaf11E9PZM7 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scaf11E9PZM7 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Scaf11E9PZM7 Gm21092-201ENSMUST00000178995 955 ntBASIC17.38■□□□□ 0.37
Scaf11E9PZM7 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Scaf11E9PZM7 Gm9645-201ENSMUST00000197131 792 ntBASIC17.38■□□□□ 0.37
Scaf11E9PZM7 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC17.38■□□□□ 0.37
Scaf11E9PZM7 Gm5298-201ENSMUST00000201122 892 ntBASIC17.38■□□□□ 0.37
Scaf11E9PZM7 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC17.38■□□□□ 0.37
Scaf11E9PZM7 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC17.38■□□□□ 0.37
Scaf11E9PZM7 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC17.38■□□□□ 0.37
Scaf11E9PZM7 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC17.38■□□□□ 0.37
Scaf11E9PZM7 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms