Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.31□□□□□ -0.44
Col6a3E9PWQ3 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 Mir6934-201ENSMUST00000183965 62 ntBASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 Gm15625-201ENSMUST00000117617 1093 ntBASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 AC156790.2-201ENSMUST00000227115 568 ntBASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Col6a3E9PWQ3 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Gm26670-202ENSMUST00000226862 340 ntBASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Gm13827-201ENSMUST00000148801 372 ntBASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Gm12164-201ENSMUST00000121695 551 ntBASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Gm29499-201ENSMUST00000189151 486 ntBASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Gm28329-201ENSMUST00000191208 689 ntBASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Gm29171-201ENSMUST00000191397 486 ntBASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Col6a3E9PWQ3 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a3E9PWQ3 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms