Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Mir7221-201ENSMUST00000184009 72 ntBASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Itm2b-204ENSMUST00000228637 783 ntBASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gm28043E0CXC2 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Gm6152-201ENSMUST00000151704 340 ntBASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 AC153961.1-201ENSMUST00000217760 385 ntBASIC12.73□□□□□ -0.37
Gm28043E0CXC2 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Gm28043E0CXC2 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.72□□□□□ -0.37
Gm28043E0CXC2 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.72□□□□□ -0.37
Gm28043E0CXC2 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms