Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Sybu-209ENSMUST00000228639 4113 ntBASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm14052-201ENSMUST00000121434 1031 ntBASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm14006-201ENSMUST00000122132 981 ntBASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Mir1941-201ENSMUST00000157834 83 ntBASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm25554-201ENSMUST00000158075 113 ntBASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 1700023G09Rik-201ENSMUST00000194513 1460 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm43196-201ENSMUST00000201762 2114 ntBASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 AC133079.1-201ENSMUST00000220943 1881 ntBASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Sgca-201ENSMUST00000100551 1465 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm9856-201ENSMUST00000217077 2578 ntBASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Mir432-201ENSMUST00000157230 75 ntBASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm27826-201ENSMUST00000175282 255 ntBASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm2448-201ENSMUST00000207080 559 ntBASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm18256-201ENSMUST00000209087 907 ntBASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm7727-201ENSMUST00000219830 671 ntBASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Rsph14-203ENSMUST00000159994 1728 ntTSL 5 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Lypd6b-201ENSMUST00000028103 2286 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm8152-201ENSMUST00000120842 637 ntBASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm12164-201ENSMUST00000121695 551 ntBASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC3.58□□□□□ -1.84
Hmcn1D3YXG0 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms