Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Gm10288-201ENSMUST00000084614 537 ntBASIC10.18□□□□□ -0.78
Chd6A3KFM7 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Chd6A3KFM7 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Gm12857-201ENSMUST00000117678 592 ntBASIC10.17□□□□□ -0.78
Chd6A3KFM7 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC10.17□□□□□ -0.78
Chd6A3KFM7 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC10.17□□□□□ -0.78
Chd6A3KFM7 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC10.17□□□□□ -0.78
Chd6A3KFM7 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC10.17□□□□□ -0.78
Chd6A3KFM7 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC10.17□□□□□ -0.78
Chd6A3KFM7 n-R5s64-201ENSMUST00000102019 119 ntBASIC10.17□□□□□ -0.78
Chd6A3KFM7 Gm22661-201ENSMUST00000104192 132 ntBASIC10.17□□□□□ -0.78
Chd6A3KFM7 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Gm12663-201ENSMUST00000118481 958 ntBASIC10.17□□□□□ -0.78
Chd6A3KFM7 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Gm22763-201ENSMUST00000158374 107 ntBASIC10.17□□□□□ -0.78
Chd6A3KFM7 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Gm19994-201ENSMUST00000217086 586 ntBASIC10.17□□□□□ -0.78
Chd6A3KFM7 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC10.17□□□□□ -0.78
Chd6A3KFM7 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Chd6A3KFM7 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.17□□□□□ -0.78
Chd6A3KFM7 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC10.16□□□□□ -0.78
Chd6A3KFM7 Gm5639-201ENSMUST00000122305 2403 ntBASIC10.16□□□□□ -0.78
Chd6A3KFM7 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Gm44291-201ENSMUST00000203102 2865 ntBASIC10.16□□□□□ -0.78
Chd6A3KFM7 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Gm22920-201ENSMUST00000102175 109 ntBASIC10.16□□□□□ -0.78
Chd6A3KFM7 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Gm42816-201ENSMUST00000198433 325 ntBASIC10.16□□□□□ -0.78
Chd6A3KFM7 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.16□□□□□ -0.78
Chd6A3KFM7 CT009536.2-201ENSMUST00000225370 665 ntBASIC10.16□□□□□ -0.78
Chd6A3KFM7 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Gm15626-201ENSMUST00000117478 868 ntBASIC10.16□□□□□ -0.78
Chd6A3KFM7 Gm13445-201ENSMUST00000121664 307 ntBASIC10.16□□□□□ -0.78
Chd6A3KFM7 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.16□□□□□ -0.78
Chd6A3KFM7 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Chd6A3KFM7 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC10.16□□□□□ -0.78
Chd6A3KFM7 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Chd6A3KFM7 AC129017.2-201ENSMUST00000226118 1284 ntBASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms