Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Cfap99A0A140LIX9 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cfap99A0A140LIX9 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Cfap99A0A140LIX9 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cfap99A0A140LIX9 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Gm26956-201ENSMUST00000182176 986 ntBASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Gm6458-201ENSMUST00000211573 635 ntBASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Gm9025-201ENSMUST00000122415 1575 ntBASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 AC113060.1-201ENSMUST00000225689 1573 ntBASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap99A0A140LIX9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Rps4l-202ENSMUST00000204242 789 ntBASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap99A0A140LIX9 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC15.16■□□□□ 0.02
Cfap99A0A140LIX9 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cfap99A0A140LIX9 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cfap99A0A140LIX9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cfap99A0A140LIX9 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cfap99A0A140LIX9 Gm8798-201ENSMUST00000211877 1661 ntBASIC15.16■□□□□ 0.02
Cfap99A0A140LIX9 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cfap99A0A140LIX9 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC15.16■□□□□ 0.02
Cfap99A0A140LIX9 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.16■□□□□ 0.02
Cfap99A0A140LIX9 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cfap99A0A140LIX9 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cfap99A0A140LIX9 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cfap99A0A140LIX9 Gm24830-201ENSMUST00000102024 166 ntBASIC15.16■□□□□ 0.02
Cfap99A0A140LIX9 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cfap99A0A140LIX9 Gm12502-201ENSMUST00000120197 444 ntBASIC15.16■□□□□ 0.02
Cfap99A0A140LIX9 Gm12715-201ENSMUST00000121430 1128 ntBASIC15.16■□□□□ 0.02
Cfap99A0A140LIX9 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.16■□□□□ 0.02
Cfap99A0A140LIX9 Gm25890-201ENSMUST00000177643 165 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms