Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf4Q9QZS2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf4Q9QZS2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.21■□□□□ 0.99
Rnf4Q9QZS2 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.21■□□□□ 0.99
Rnf4Q9QZS2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf4Q9QZS2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf4Q9QZS2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Rnf4Q9QZS2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf4Q9QZS2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rnf4Q9QZS2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf4Q9QZS2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.21■□□□□ 0.99
Rnf4Q9QZS2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Rnf4Q9QZS2 Terc-201ENSMUST00000082862 423 ntBASIC21.2■□□□□ 0.98
Rnf4Q9QZS2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf4Q9QZS2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf4Q9QZS2 Gm4799-201ENSMUST00000095396 657 ntBASIC21.19■□□□□ 0.98
Rnf4Q9QZS2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf4Q9QZS2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Rnf4Q9QZS2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf4Q9QZS2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf4Q9QZS2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf4Q9QZS2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf4Q9QZS2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf4Q9QZS2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf4Q9QZS2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf4Q9QZS2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf4Q9QZS2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Rnf4Q9QZS2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf4Q9QZS2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf4Q9QZS2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Rnf4Q9QZS2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rnf4Q9QZS2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Rnf4Q9QZS2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf4Q9QZS2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf4Q9QZS2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.17■□□□□ 0.98
Rnf4Q9QZS2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf4Q9QZS2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.17■□□□□ 0.98
Rnf4Q9QZS2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf4Q9QZS2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf4Q9QZS2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf4Q9QZS2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.17■□□□□ 0.98
Rnf4Q9QZS2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.17■□□□□ 0.98
Rnf4Q9QZS2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rnf4Q9QZS2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf4Q9QZS2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf4Q9QZS2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Rnf4Q9QZS2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.16■□□□□ 0.98
Rnf4Q9QZS2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf4Q9QZS2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf4Q9QZS2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf4Q9QZS2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.16■□□□□ 0.98
Rnf4Q9QZS2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rnf4Q9QZS2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.15■□□□□ 0.98
Rnf4Q9QZS2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rnf4Q9QZS2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.15■□□□□ 0.98
Rnf4Q9QZS2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Rnf4Q9QZS2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rnf4Q9QZS2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Rnf4Q9QZS2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Rnf4Q9QZS2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf4Q9QZS2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf4Q9QZS2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf4Q9QZS2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf4Q9QZS2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf4Q9QZS2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rnf4Q9QZS2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf4Q9QZS2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf4Q9QZS2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.13■□□□□ 0.97
Rnf4Q9QZS2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf4Q9QZS2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf4Q9QZS2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rnf4Q9QZS2 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.13■□□□□ 0.97
Rnf4Q9QZS2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.13■□□□□ 0.97
Rnf4Q9QZS2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf4Q9QZS2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Rnf4Q9QZS2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf4Q9QZS2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf4Q9QZS2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf4Q9QZS2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf4Q9QZS2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf4Q9QZS2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rnf4Q9QZS2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Rnf4Q9QZS2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf4Q9QZS2 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf4Q9QZS2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Rnf4Q9QZS2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf4Q9QZS2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.11■□□□□ 0.97
Rnf4Q9QZS2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.11■□□□□ 0.97
Rnf4Q9QZS2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf4Q9QZS2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf4Q9QZS2 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rnf4Q9QZS2 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.1■□□□□ 0.97
Rnf4Q9QZS2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf4Q9QZS2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf4Q9QZS2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf4Q9QZS2 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Rnf4Q9QZS2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Rnf4Q9QZS2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf4Q9QZS2 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rnf4Q9QZS2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms