Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.01■□□□□ 0.63
Clcf1Q9QZM3 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.01■□□□□ 0.63
Clcf1Q9QZM3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clcf1Q9QZM3 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.01■□□□□ 0.63
Clcf1Q9QZM3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Clcf1Q9QZM3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clcf1Q9QZM3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clcf1Q9QZM3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clcf1Q9QZM3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19■□□□□ 0.63
Clcf1Q9QZM3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Clcf1Q9QZM3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Clcf1Q9QZM3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clcf1Q9QZM3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Clcf1Q9QZM3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcf1Q9QZM3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcf1Q9QZM3 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.99■□□□□ 0.63
Clcf1Q9QZM3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcf1Q9QZM3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcf1Q9QZM3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcf1Q9QZM3 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.99■□□□□ 0.63
Clcf1Q9QZM3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Clcf1Q9QZM3 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcf1Q9QZM3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clcf1Q9QZM3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcf1Q9QZM3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcf1Q9QZM3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcf1Q9QZM3 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.98■□□□□ 0.63
Clcf1Q9QZM3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clcf1Q9QZM3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Clcf1Q9QZM3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
Clcf1Q9QZM3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Clcf1Q9QZM3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Clcf1Q9QZM3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clcf1Q9QZM3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Clcf1Q9QZM3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Clcf1Q9QZM3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcf1Q9QZM3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcf1Q9QZM3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcf1Q9QZM3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Clcf1Q9QZM3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clcf1Q9QZM3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.97■□□□□ 0.63
Clcf1Q9QZM3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcf1Q9QZM3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcf1Q9QZM3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Clcf1Q9QZM3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcf1Q9QZM3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcf1Q9QZM3 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.96■□□□□ 0.63
Clcf1Q9QZM3 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcf1Q9QZM3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clcf1Q9QZM3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Clcf1Q9QZM3 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.96■□□□□ 0.63
Clcf1Q9QZM3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Clcf1Q9QZM3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.95■□□□□ 0.62
Clcf1Q9QZM3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.95■□□□□ 0.62
Clcf1Q9QZM3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Clcf1Q9QZM3 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcf1Q9QZM3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.95■□□□□ 0.62
Clcf1Q9QZM3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.95■□□□□ 0.62
Clcf1Q9QZM3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.95■□□□□ 0.62
Clcf1Q9QZM3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.95■□□□□ 0.62
Clcf1Q9QZM3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcf1Q9QZM3 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Clcf1Q9QZM3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcf1Q9QZM3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clcf1Q9QZM3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Clcf1Q9QZM3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
Clcf1Q9QZM3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcf1Q9QZM3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.94■□□□□ 0.62
Clcf1Q9QZM3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcf1Q9QZM3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcf1Q9QZM3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Clcf1Q9QZM3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Clcf1Q9QZM3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcf1Q9QZM3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Clcf1Q9QZM3 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.93■□□□□ 0.62
Clcf1Q9QZM3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcf1Q9QZM3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcf1Q9QZM3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcf1Q9QZM3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Clcf1Q9QZM3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Clcf1Q9QZM3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Clcf1Q9QZM3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.93■□□□□ 0.62
Clcf1Q9QZM3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.93■□□□□ 0.62
Clcf1Q9QZM3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcf1Q9QZM3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.92■□□□□ 0.62
Clcf1Q9QZM3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Clcf1Q9QZM3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcf1Q9QZM3 Etf1-202ENSMUST00000180351 108 ntBASIC18.92■□□□□ 0.62
Clcf1Q9QZM3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.92■□□□□ 0.62
Clcf1Q9QZM3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcf1Q9QZM3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcf1Q9QZM3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Clcf1Q9QZM3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcf1Q9QZM3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.91■□□□□ 0.62
Clcf1Q9QZM3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcf1Q9QZM3 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcf1Q9QZM3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clcf1Q9QZM3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clcf1Q9QZM3 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.9■□□□□ 0.62
Clcf1Q9QZM3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms