Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Upf1Q9EPU0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
Upf1Q9EPU0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Upf1Q9EPU0 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Upf1Q9EPU0 Gm44949-201ENSMUST00000206423 1450 ntBASIC24.81■■□□□ 1.56
Upf1Q9EPU0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Upf1Q9EPU0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Upf1Q9EPU0 Gm12933-201ENSMUST00000120203 872 ntBASIC24.8■■□□□ 1.56
Upf1Q9EPU0 Gm7977-201ENSMUST00000193787 748 ntBASIC24.8■■□□□ 1.56
Upf1Q9EPU0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC24.8■■□□□ 1.56
Upf1Q9EPU0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Upf1Q9EPU0 AC158538.1-201ENSMUST00000225870 294 ntBASIC24.8■■□□□ 1.56
Upf1Q9EPU0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Upf1Q9EPU0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Upf1Q9EPU0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Upf1Q9EPU0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC24.79■■□□□ 1.56
Upf1Q9EPU0 Gm27801-201ENSMUST00000184174 223 ntBASIC24.79■■□□□ 1.56
Upf1Q9EPU0 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Upf1Q9EPU0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC24.79■■□□□ 1.56
Upf1Q9EPU0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Upf1Q9EPU0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.79■■□□□ 1.56
Upf1Q9EPU0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC24.78■■□□□ 1.56
Upf1Q9EPU0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Upf1Q9EPU0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
Upf1Q9EPU0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC24.78■■□□□ 1.56
Upf1Q9EPU0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Upf1Q9EPU0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Upf1Q9EPU0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC24.78■■□□□ 1.56
Upf1Q9EPU0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Upf1Q9EPU0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Upf1Q9EPU0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Upf1Q9EPU0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Upf1Q9EPU0 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Upf1Q9EPU0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Upf1Q9EPU0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Upf1Q9EPU0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
Upf1Q9EPU0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.76■■□□□ 1.55
Upf1Q9EPU0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Upf1Q9EPU0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Upf1Q9EPU0 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Upf1Q9EPU0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Upf1Q9EPU0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Upf1Q9EPU0 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Upf1Q9EPU0 Zxda-201ENSMUST00000117281 2621 ntBASIC24.75■■□□□ 1.55
Upf1Q9EPU0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Upf1Q9EPU0 Gm8770-201ENSMUST00000121113 1109 ntBASIC24.74■■□□□ 1.55
Upf1Q9EPU0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
Upf1Q9EPU0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC24.74■■□□□ 1.55
Upf1Q9EPU0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Upf1Q9EPU0 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC24.73■■□□□ 1.55
Upf1Q9EPU0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Upf1Q9EPU0 Gm7160-202ENSMUST00000188519 1027 ntBASIC24.73■■□□□ 1.55
Upf1Q9EPU0 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC24.73■■□□□ 1.55
Upf1Q9EPU0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
Upf1Q9EPU0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC24.72■■□□□ 1.55
Upf1Q9EPU0 Gm10653-202ENSMUST00000139570 835 ntBASIC24.72■■□□□ 1.55
Upf1Q9EPU0 Gm22240-201ENSMUST00000175225 82 ntBASIC24.72■■□□□ 1.55
Upf1Q9EPU0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Upf1Q9EPU0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
Upf1Q9EPU0 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
Upf1Q9EPU0 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Upf1Q9EPU0 Gm6085-201ENSMUST00000182774 1470 ntBASIC24.7■■□□□ 1.55
Upf1Q9EPU0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Upf1Q9EPU0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
Upf1Q9EPU0 Gm40848-201ENSMUST00000221998 324 ntBASIC24.7■■□□□ 1.54
Upf1Q9EPU0 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Upf1Q9EPU0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Upf1Q9EPU0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Upf1Q9EPU0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Upf1Q9EPU0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Upf1Q9EPU0 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.69■■□□□ 1.54
Upf1Q9EPU0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Upf1Q9EPU0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Upf1Q9EPU0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC24.68■■□□□ 1.54
Upf1Q9EPU0 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Upf1Q9EPU0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC24.68■■□□□ 1.54
Upf1Q9EPU0 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
Upf1Q9EPU0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Upf1Q9EPU0 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC24.67■■□□□ 1.54
Upf1Q9EPU0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Upf1Q9EPU0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC24.67■■□□□ 1.54
Upf1Q9EPU0 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Upf1Q9EPU0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC24.66■■□□□ 1.54
Upf1Q9EPU0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC24.66■■□□□ 1.54
Upf1Q9EPU0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Upf1Q9EPU0 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Upf1Q9EPU0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.65■■□□□ 1.54
Upf1Q9EPU0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Upf1Q9EPU0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC24.65■■□□□ 1.54
Upf1Q9EPU0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC24.65■■□□□ 1.54
Upf1Q9EPU0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Upf1Q9EPU0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC24.65■■□□□ 1.54
Upf1Q9EPU0 Gm43759-201ENSMUST00000196925 1261 ntBASIC24.65■■□□□ 1.54
Upf1Q9EPU0 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC24.64■■□□□ 1.54
Upf1Q9EPU0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Upf1Q9EPU0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC24.64■■□□□ 1.54
Upf1Q9EPU0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Upf1Q9EPU0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC24.64■■□□□ 1.54
Upf1Q9EPU0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Upf1Q9EPU0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms