Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rrp8Q9DB85 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rrp8Q9DB85 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rrp8Q9DB85 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rrp8Q9DB85 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rrp8Q9DB85 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
Rrp8Q9DB85 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.68■□□□□ 0.9
Rrp8Q9DB85 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.68■□□□□ 0.9
Rrp8Q9DB85 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rrp8Q9DB85 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rrp8Q9DB85 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rrp8Q9DB85 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rrp8Q9DB85 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.67■□□□□ 0.9
Rrp8Q9DB85 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rrp8Q9DB85 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rrp8Q9DB85 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rrp8Q9DB85 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rrp8Q9DB85 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.66■□□□□ 0.9
Rrp8Q9DB85 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rrp8Q9DB85 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rrp8Q9DB85 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rrp8Q9DB85 Gm9870-201ENSMUST00000063874 645 ntBASIC20.66■□□□□ 0.9
Rrp8Q9DB85 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rrp8Q9DB85 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Rrp8Q9DB85 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rrp8Q9DB85 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rrp8Q9DB85 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rrp8Q9DB85 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rrp8Q9DB85 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
Rrp8Q9DB85 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.65■□□□□ 0.9
Rrp8Q9DB85 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.65■□□□□ 0.9
Rrp8Q9DB85 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.65■□□□□ 0.9
Rrp8Q9DB85 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Rrp8Q9DB85 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rrp8Q9DB85 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.64■□□□□ 0.89
Rrp8Q9DB85 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.64■□□□□ 0.89
Rrp8Q9DB85 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rrp8Q9DB85 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rrp8Q9DB85 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rrp8Q9DB85 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rrp8Q9DB85 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rrp8Q9DB85 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Rrp8Q9DB85 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rrp8Q9DB85 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rrp8Q9DB85 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Rrp8Q9DB85 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rrp8Q9DB85 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rrp8Q9DB85 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rrp8Q9DB85 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.62■□□□□ 0.89
Rrp8Q9DB85 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rrp8Q9DB85 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rrp8Q9DB85 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rrp8Q9DB85 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.61■□□□□ 0.89
Rrp8Q9DB85 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Rrp8Q9DB85 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rrp8Q9DB85 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rrp8Q9DB85 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rrp8Q9DB85 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rrp8Q9DB85 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rrp8Q9DB85 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.6■□□□□ 0.89
Rrp8Q9DB85 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.6■□□□□ 0.89
Rrp8Q9DB85 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Rrp8Q9DB85 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rrp8Q9DB85 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rrp8Q9DB85 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Rrp8Q9DB85 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rrp8Q9DB85 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rrp8Q9DB85 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rrp8Q9DB85 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Rrp8Q9DB85 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rrp8Q9DB85 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rrp8Q9DB85 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.59■□□□□ 0.89
Rrp8Q9DB85 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.58■□□□□ 0.89
Rrp8Q9DB85 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Rrp8Q9DB85 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.58■□□□□ 0.89
Rrp8Q9DB85 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.58■□□□□ 0.89
Rrp8Q9DB85 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Rrp8Q9DB85 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rrp8Q9DB85 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rrp8Q9DB85 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rrp8Q9DB85 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rrp8Q9DB85 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
Rrp8Q9DB85 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rrp8Q9DB85 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rrp8Q9DB85 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rrp8Q9DB85 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.57■□□□□ 0.88
Rrp8Q9DB85 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rrp8Q9DB85 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rrp8Q9DB85 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Rrp8Q9DB85 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rrp8Q9DB85 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rrp8Q9DB85 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rrp8Q9DB85 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
Rrp8Q9DB85 Gm43137-201ENSMUST00000198052 594 ntBASIC20.56■□□□□ 0.88
Rrp8Q9DB85 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.56■□□□□ 0.88
Rrp8Q9DB85 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rrp8Q9DB85 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rrp8Q9DB85 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rrp8Q9DB85 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rrp8Q9DB85 Gm8495-201ENSMUST00000188740 694 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms