Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Chmp1b1Q99LU0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp1b1Q99LU0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp1b1Q99LU0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Chmp1b1Q99LU0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Chmp1b1Q99LU0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp1b1Q99LU0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Chmp1b1Q99LU0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp1b1Q99LU0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Chmp1b1Q99LU0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp1b1Q99LU0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp1b1Q99LU0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Chmp1b1Q99LU0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Chmp1b1Q99LU0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp1b1Q99LU0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.73■□□□□ 0.75
Chmp1b1Q99LU0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.73■□□□□ 0.75
Chmp1b1Q99LU0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp1b1Q99LU0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.73■□□□□ 0.75
Chmp1b1Q99LU0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp1b1Q99LU0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp1b1Q99LU0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Chmp1b1Q99LU0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.72■□□□□ 0.75
Chmp1b1Q99LU0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp1b1Q99LU0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Chmp1b1Q99LU0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Chmp1b1Q99LU0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Chmp1b1Q99LU0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Chmp1b1Q99LU0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp1b1Q99LU0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp1b1Q99LU0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.71■□□□□ 0.75
Chmp1b1Q99LU0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp1b1Q99LU0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp1b1Q99LU0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Chmp1b1Q99LU0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Chmp1b1Q99LU0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Chmp1b1Q99LU0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Chmp1b1Q99LU0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.71■□□□□ 0.75
Chmp1b1Q99LU0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp1b1Q99LU0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Chmp1b1Q99LU0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Chmp1b1Q99LU0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
Chmp1b1Q99LU0 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp1b1Q99LU0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.69■□□□□ 0.74
Chmp1b1Q99LU0 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp1b1Q99LU0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp1b1Q99LU0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.69■□□□□ 0.74
Chmp1b1Q99LU0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Chmp1b1Q99LU0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Chmp1b1Q99LU0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp1b1Q99LU0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp1b1Q99LU0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp1b1Q99LU0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.68■□□□□ 0.74
Chmp1b1Q99LU0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp1b1Q99LU0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.68■□□□□ 0.74
Chmp1b1Q99LU0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chmp1b1Q99LU0 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.67■□□□□ 0.74
Chmp1b1Q99LU0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp1b1Q99LU0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp1b1Q99LU0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Chmp1b1Q99LU0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.67■□□□□ 0.74
Chmp1b1Q99LU0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp1b1Q99LU0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp1b1Q99LU0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp1b1Q99LU0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp1b1Q99LU0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp1b1Q99LU0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chmp1b1Q99LU0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp1b1Q99LU0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp1b1Q99LU0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp1b1Q99LU0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.66■□□□□ 0.74
Chmp1b1Q99LU0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp1b1Q99LU0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chmp1b1Q99LU0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.65■□□□□ 0.74
Chmp1b1Q99LU0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp1b1Q99LU0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.65■□□□□ 0.74
Chmp1b1Q99LU0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp1b1Q99LU0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.65■□□□□ 0.74
Chmp1b1Q99LU0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.65■□□□□ 0.74
Chmp1b1Q99LU0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Chmp1b1Q99LU0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp1b1Q99LU0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp1b1Q99LU0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp1b1Q99LU0 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Chmp1b1Q99LU0 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chmp1b1Q99LU0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Chmp1b1Q99LU0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Chmp1b1Q99LU0 Gm5921-201ENSMUST00000075898 882 ntBASIC19.64■□□□□ 0.73
Chmp1b1Q99LU0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp1b1Q99LU0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.64■□□□□ 0.73
Chmp1b1Q99LU0 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp1b1Q99LU0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp1b1Q99LU0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp1b1Q99LU0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chmp1b1Q99LU0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.63■□□□□ 0.73
Chmp1b1Q99LU0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.63■□□□□ 0.73
Chmp1b1Q99LU0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp1b1Q99LU0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.63■□□□□ 0.73
Chmp1b1Q99LU0 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.63■□□□□ 0.73
Chmp1b1Q99LU0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chmp1b1Q99LU0 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.63■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 405 ms