Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Thumpd1Q99J36 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Thumpd1Q99J36 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Thumpd1Q99J36 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Thumpd1Q99J36 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Thumpd1Q99J36 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Thumpd1Q99J36 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Thumpd1Q99J36 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Thumpd1Q99J36 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Thumpd1Q99J36 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.71■□□□□ 0.59
Thumpd1Q99J36 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Thumpd1Q99J36 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Thumpd1Q99J36 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Thumpd1Q99J36 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Thumpd1Q99J36 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Thumpd1Q99J36 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.71■□□□□ 0.59
Thumpd1Q99J36 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.71■□□□□ 0.59
Thumpd1Q99J36 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Thumpd1Q99J36 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.71■□□□□ 0.59
Thumpd1Q99J36 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.71■□□□□ 0.59
Thumpd1Q99J36 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Thumpd1Q99J36 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.7■□□□□ 0.58
Thumpd1Q99J36 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Thumpd1Q99J36 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Thumpd1Q99J36 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Thumpd1Q99J36 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Thumpd1Q99J36 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.7■□□□□ 0.58
Thumpd1Q99J36 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.7■□□□□ 0.58
Thumpd1Q99J36 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Thumpd1Q99J36 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Thumpd1Q99J36 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Thumpd1Q99J36 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Thumpd1Q99J36 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Thumpd1Q99J36 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thumpd1Q99J36 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thumpd1Q99J36 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thumpd1Q99J36 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Thumpd1Q99J36 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thumpd1Q99J36 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thumpd1Q99J36 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thumpd1Q99J36 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Thumpd1Q99J36 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Thumpd1Q99J36 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Thumpd1Q99J36 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thumpd1Q99J36 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thumpd1Q99J36 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.68■□□□□ 0.58
Thumpd1Q99J36 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Thumpd1Q99J36 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Thumpd1Q99J36 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.68■□□□□ 0.58
Thumpd1Q99J36 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Thumpd1Q99J36 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Thumpd1Q99J36 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Thumpd1Q99J36 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Thumpd1Q99J36 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Thumpd1Q99J36 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Thumpd1Q99J36 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Thumpd1Q99J36 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Thumpd1Q99J36 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Thumpd1Q99J36 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Thumpd1Q99J36 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Thumpd1Q99J36 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Thumpd1Q99J36 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Thumpd1Q99J36 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Thumpd1Q99J36 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Thumpd1Q99J36 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Thumpd1Q99J36 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Thumpd1Q99J36 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Thumpd1Q99J36 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Thumpd1Q99J36 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Thumpd1Q99J36 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Thumpd1Q99J36 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.65■□□□□ 0.58
Thumpd1Q99J36 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Thumpd1Q99J36 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Thumpd1Q99J36 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Thumpd1Q99J36 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.65■□□□□ 0.58
Thumpd1Q99J36 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Thumpd1Q99J36 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Thumpd1Q99J36 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
Thumpd1Q99J36 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Thumpd1Q99J36 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Thumpd1Q99J36 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Thumpd1Q99J36 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Thumpd1Q99J36 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.64■□□□□ 0.57
Thumpd1Q99J36 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.64■□□□□ 0.57
Thumpd1Q99J36 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Thumpd1Q99J36 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Thumpd1Q99J36 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Thumpd1Q99J36 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Thumpd1Q99J36 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Thumpd1Q99J36 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Thumpd1Q99J36 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Thumpd1Q99J36 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.63■□□□□ 0.57
Thumpd1Q99J36 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Thumpd1Q99J36 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.63■□□□□ 0.57
Thumpd1Q99J36 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Thumpd1Q99J36 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Thumpd1Q99J36 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Thumpd1Q99J36 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Thumpd1Q99J36 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Thumpd1Q99J36 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms