Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
StrcQ8VIM6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
StrcQ8VIM6 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
StrcQ8VIM6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
StrcQ8VIM6 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
StrcQ8VIM6 Gm8770-201ENSMUST00000121113 1109 ntBASIC25.98■■□□□ 1.75
StrcQ8VIM6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
StrcQ8VIM6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC25.98■■□□□ 1.75
StrcQ8VIM6 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC25.98■■□□□ 1.75
StrcQ8VIM6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
StrcQ8VIM6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
StrcQ8VIM6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
StrcQ8VIM6 Gm7291-201ENSMUST00000199147 382 ntBASIC25.97■■□□□ 1.75
StrcQ8VIM6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
StrcQ8VIM6 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
StrcQ8VIM6 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
StrcQ8VIM6 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
StrcQ8VIM6 Gm9870-201ENSMUST00000063874 645 ntBASIC25.96■■□□□ 1.75
StrcQ8VIM6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC25.96■■□□□ 1.75
StrcQ8VIM6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC25.95■■□□□ 1.75
StrcQ8VIM6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
StrcQ8VIM6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC25.95■■□□□ 1.75
StrcQ8VIM6 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
StrcQ8VIM6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC25.95■■□□□ 1.75
StrcQ8VIM6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
StrcQ8VIM6 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
StrcQ8VIM6 AC158990.1-201ENSMUST00000221450 2016 ntBASIC25.95■■□□□ 1.74
StrcQ8VIM6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
StrcQ8VIM6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
StrcQ8VIM6 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
StrcQ8VIM6 Gm27011-201ENSMUST00000182352 972 ntBASIC25.94■■□□□ 1.74
StrcQ8VIM6 Wdr70-203ENSMUST00000227371 1130 ntBASIC25.94■■□□□ 1.74
StrcQ8VIM6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC25.94■■□□□ 1.74
StrcQ8VIM6 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
StrcQ8VIM6 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
StrcQ8VIM6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC25.93■■□□□ 1.74
StrcQ8VIM6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
StrcQ8VIM6 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
StrcQ8VIM6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
StrcQ8VIM6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
StrcQ8VIM6 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
StrcQ8VIM6 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC25.92■■□□□ 1.74
StrcQ8VIM6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
StrcQ8VIM6 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
StrcQ8VIM6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
StrcQ8VIM6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
StrcQ8VIM6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
StrcQ8VIM6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
StrcQ8VIM6 Gm10849-201ENSMUST00000100397 618 ntBASIC25.91■■□□□ 1.74
StrcQ8VIM6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
StrcQ8VIM6 Gm8493-201ENSMUST00000196881 489 ntBASIC25.91■■□□□ 1.74
StrcQ8VIM6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
StrcQ8VIM6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
StrcQ8VIM6 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC25.91■■□□□ 1.74
StrcQ8VIM6 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC25.9■■□□□ 1.74
StrcQ8VIM6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
StrcQ8VIM6 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
StrcQ8VIM6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
StrcQ8VIM6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC25.9■■□□□ 1.74
StrcQ8VIM6 Gm6934-201ENSMUST00000194780 1905 ntBASIC25.89■■□□□ 1.74
StrcQ8VIM6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
StrcQ8VIM6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC25.89■■□□□ 1.74
StrcQ8VIM6 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC25.89■■□□□ 1.74
StrcQ8VIM6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC25.89■■□□□ 1.74
StrcQ8VIM6 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
StrcQ8VIM6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC25.88■■□□□ 1.73
StrcQ8VIM6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
StrcQ8VIM6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
StrcQ8VIM6 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC25.88■■□□□ 1.73
StrcQ8VIM6 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
StrcQ8VIM6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
StrcQ8VIM6 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.88■■□□□ 1.73
StrcQ8VIM6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
StrcQ8VIM6 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
StrcQ8VIM6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
StrcQ8VIM6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
StrcQ8VIM6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
StrcQ8VIM6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
StrcQ8VIM6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
StrcQ8VIM6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
StrcQ8VIM6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
StrcQ8VIM6 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC25.85■■□□□ 1.73
StrcQ8VIM6 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC25.85■■□□□ 1.73
StrcQ8VIM6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC25.85■■□□□ 1.73
StrcQ8VIM6 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC25.84■■□□□ 1.73
StrcQ8VIM6 Gm37179-201ENSMUST00000194862 823 ntBASIC25.84■■□□□ 1.73
StrcQ8VIM6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
StrcQ8VIM6 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
StrcQ8VIM6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
StrcQ8VIM6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
StrcQ8VIM6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC25.84■■□□□ 1.73
StrcQ8VIM6 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
StrcQ8VIM6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
StrcQ8VIM6 Gm5576-201ENSMUST00000075809 1236 ntBASIC25.84■■□□□ 1.73
StrcQ8VIM6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
StrcQ8VIM6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC25.83■■□□□ 1.73
StrcQ8VIM6 Spcs1-207ENSMUST00000228767 1008 ntBASIC25.83■■□□□ 1.73
StrcQ8VIM6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
StrcQ8VIM6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
StrcQ8VIM6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms