Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sh3kbp1Q8R550 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sh3kbp1Q8R550 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sh3kbp1Q8R550 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.64■■□□□ 1.06
Sh3kbp1Q8R550 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sh3kbp1Q8R550 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Sh3kbp1Q8R550 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sh3kbp1Q8R550 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.64■■□□□ 1.05
Sh3kbp1Q8R550 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sh3kbp1Q8R550 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Sh3kbp1Q8R550 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.63■■□□□ 1.05
Sh3kbp1Q8R550 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.63■■□□□ 1.05
Sh3kbp1Q8R550 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sh3kbp1Q8R550 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.63■■□□□ 1.05
Sh3kbp1Q8R550 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sh3kbp1Q8R550 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Sh3kbp1Q8R550 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3kbp1Q8R550 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3kbp1Q8R550 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3kbp1Q8R550 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.62■■□□□ 1.05
Sh3kbp1Q8R550 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh3kbp1Q8R550 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.62■■□□□ 1.05
Sh3kbp1Q8R550 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.62■■□□□ 1.05
Sh3kbp1Q8R550 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh3kbp1Q8R550 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh3kbp1Q8R550 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
Sh3kbp1Q8R550 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.61■■□□□ 1.05
Sh3kbp1Q8R550 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh3kbp1Q8R550 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Sh3kbp1Q8R550 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh3kbp1Q8R550 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Sh3kbp1Q8R550 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sh3kbp1Q8R550 Gm7417-201ENSMUST00000192950 473 ntBASIC21.6■■□□□ 1.05
Sh3kbp1Q8R550 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.6■■□□□ 1.05
Sh3kbp1Q8R550 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sh3kbp1Q8R550 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sh3kbp1Q8R550 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.59■■□□□ 1.05
Sh3kbp1Q8R550 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sh3kbp1Q8R550 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.59■■□□□ 1.05
Sh3kbp1Q8R550 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.59■■□□□ 1.05
Sh3kbp1Q8R550 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sh3kbp1Q8R550 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Sh3kbp1Q8R550 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Sh3kbp1Q8R550 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sh3kbp1Q8R550 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sh3kbp1Q8R550 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sh3kbp1Q8R550 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.58■■□□□ 1.05
Sh3kbp1Q8R550 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.58■■□□□ 1.05
Sh3kbp1Q8R550 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Sh3kbp1Q8R550 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sh3kbp1Q8R550 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Sh3kbp1Q8R550 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sh3kbp1Q8R550 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sh3kbp1Q8R550 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sh3kbp1Q8R550 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sh3kbp1Q8R550 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Sh3kbp1Q8R550 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.57■■□□□ 1.04
Sh3kbp1Q8R550 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.57■■□□□ 1.04
Sh3kbp1Q8R550 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Sh3kbp1Q8R550 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sh3kbp1Q8R550 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.56■■□□□ 1.04
Sh3kbp1Q8R550 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Sh3kbp1Q8R550 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.56■■□□□ 1.04
Sh3kbp1Q8R550 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Sh3kbp1Q8R550 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Sh3kbp1Q8R550 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sh3kbp1Q8R550 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Sh3kbp1Q8R550 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sh3kbp1Q8R550 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sh3kbp1Q8R550 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3kbp1Q8R550 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.55■■□□□ 1.04
Sh3kbp1Q8R550 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3kbp1Q8R550 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.55■■□□□ 1.04
Sh3kbp1Q8R550 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.55■■□□□ 1.04
Sh3kbp1Q8R550 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.55■■□□□ 1.04
Sh3kbp1Q8R550 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.55■■□□□ 1.04
Sh3kbp1Q8R550 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.55■■□□□ 1.04
Sh3kbp1Q8R550 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Sh3kbp1Q8R550 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.55■■□□□ 1.04
Sh3kbp1Q8R550 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3kbp1Q8R550 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sh3kbp1Q8R550 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sh3kbp1Q8R550 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sh3kbp1Q8R550 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.53■■□□□ 1.04
Sh3kbp1Q8R550 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3kbp1Q8R550 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3kbp1Q8R550 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3kbp1Q8R550 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3kbp1Q8R550 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3kbp1Q8R550 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.53■■□□□ 1.04
Sh3kbp1Q8R550 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3kbp1Q8R550 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3kbp1Q8R550 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3kbp1Q8R550 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh3kbp1Q8R550 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.52■■□□□ 1.04
Sh3kbp1Q8R550 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sh3kbp1Q8R550 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sh3kbp1Q8R550 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sh3kbp1Q8R550 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sh3kbp1Q8R550 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms