Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Col23a1Q8K4G2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC26.29■■□□□ 1.8
Col23a1Q8K4G2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC26.28■■□□□ 1.8
Col23a1Q8K4G2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Col23a1Q8K4G2 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Col23a1Q8K4G2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col23a1Q8K4G2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col23a1Q8K4G2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Col23a1Q8K4G2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Col23a1Q8K4G2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC26.28■■□□□ 1.8
Col23a1Q8K4G2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Col23a1Q8K4G2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Col23a1Q8K4G2 Gm12251-201ENSMUST00000117893 792 ntBASIC26.27■■□□□ 1.8
Col23a1Q8K4G2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC26.27■■□□□ 1.8
Col23a1Q8K4G2 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Col23a1Q8K4G2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Col23a1Q8K4G2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Col23a1Q8K4G2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC26.26■■□□□ 1.79
Col23a1Q8K4G2 Gm37179-201ENSMUST00000194862 823 ntBASIC26.26■■□□□ 1.79
Col23a1Q8K4G2 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC26.26■■□□□ 1.79
Col23a1Q8K4G2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Col23a1Q8K4G2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC26.26■■□□□ 1.79
Col23a1Q8K4G2 Gm5576-201ENSMUST00000075809 1236 ntBASIC26.26■■□□□ 1.79
Col23a1Q8K4G2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Col23a1Q8K4G2 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC26.25■■□□□ 1.79
Col23a1Q8K4G2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Col23a1Q8K4G2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Col23a1Q8K4G2 Gm10493-201ENSMUST00000097270 612 ntBASIC26.25■■□□□ 1.79
Col23a1Q8K4G2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC26.25■■□□□ 1.79
Col23a1Q8K4G2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Col23a1Q8K4G2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Col23a1Q8K4G2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC26.24■■□□□ 1.79
Col23a1Q8K4G2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Col23a1Q8K4G2 Gm10849-201ENSMUST00000100397 618 ntBASIC26.24■■□□□ 1.79
Col23a1Q8K4G2 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC26.24■■□□□ 1.79
Col23a1Q8K4G2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Col23a1Q8K4G2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Col23a1Q8K4G2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC26.23■■□□□ 1.79
Col23a1Q8K4G2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Col23a1Q8K4G2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col23a1Q8K4G2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC26.23■■□□□ 1.79
Col23a1Q8K4G2 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC26.23■■□□□ 1.79
Col23a1Q8K4G2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col23a1Q8K4G2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Col23a1Q8K4G2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col23a1Q8K4G2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Col23a1Q8K4G2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Col23a1Q8K4G2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Col23a1Q8K4G2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Col23a1Q8K4G2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Col23a1Q8K4G2 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Col23a1Q8K4G2 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Col23a1Q8K4G2 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Col23a1Q8K4G2 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Col23a1Q8K4G2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Col23a1Q8K4G2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC26.21■■□□□ 1.79
Col23a1Q8K4G2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC26.21■■□□□ 1.79
Col23a1Q8K4G2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Col23a1Q8K4G2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Col23a1Q8K4G2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC26.2■■□□□ 1.78
Col23a1Q8K4G2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Col23a1Q8K4G2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Col23a1Q8K4G2 Gm42642-201ENSMUST00000200683 355 ntBASIC26.19■■□□□ 1.78
Col23a1Q8K4G2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Col23a1Q8K4G2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Col23a1Q8K4G2 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Col23a1Q8K4G2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Col23a1Q8K4G2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Col23a1Q8K4G2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Col23a1Q8K4G2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col23a1Q8K4G2 Gm8770-201ENSMUST00000121113 1109 ntBASIC26.17■■□□□ 1.78
Col23a1Q8K4G2 Gm10657-201ENSMUST00000193528 1031 ntBASIC26.17■■□□□ 1.78
Col23a1Q8K4G2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC26.17■■□□□ 1.78
Col23a1Q8K4G2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col23a1Q8K4G2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col23a1Q8K4G2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col23a1Q8K4G2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Col23a1Q8K4G2 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Col23a1Q8K4G2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Col23a1Q8K4G2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Col23a1Q8K4G2 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Col23a1Q8K4G2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Col23a1Q8K4G2 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Col23a1Q8K4G2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Col23a1Q8K4G2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Col23a1Q8K4G2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
Col23a1Q8K4G2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC26.13■■□□□ 1.77
Col23a1Q8K4G2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
Col23a1Q8K4G2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
Col23a1Q8K4G2 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Col23a1Q8K4G2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Col23a1Q8K4G2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Col23a1Q8K4G2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC26.12■■□□□ 1.77
Col23a1Q8K4G2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC26.12■■□□□ 1.77
Col23a1Q8K4G2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC26.12■■□□□ 1.77
Col23a1Q8K4G2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Col23a1Q8K4G2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Col23a1Q8K4G2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Col23a1Q8K4G2 AC158990.1-201ENSMUST00000221450 2016 ntBASIC26.11■■□□□ 1.77
Col23a1Q8K4G2 Gm26833-201ENSMUST00000180899 440 ntBASIC26.11■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms