Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CroccQ8CJ40 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CroccQ8CJ40 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CroccQ8CJ40 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CroccQ8CJ40 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CroccQ8CJ40 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CroccQ8CJ40 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CroccQ8CJ40 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CroccQ8CJ40 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CroccQ8CJ40 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CroccQ8CJ40 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CroccQ8CJ40 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CroccQ8CJ40 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CroccQ8CJ40 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CroccQ8CJ40 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.22■□□□□ 0.83
CroccQ8CJ40 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.22■□□□□ 0.83
CroccQ8CJ40 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CroccQ8CJ40 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CroccQ8CJ40 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CroccQ8CJ40 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CroccQ8CJ40 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CroccQ8CJ40 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CroccQ8CJ40 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CroccQ8CJ40 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CroccQ8CJ40 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CroccQ8CJ40 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CroccQ8CJ40 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CroccQ8CJ40 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CroccQ8CJ40 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CroccQ8CJ40 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CroccQ8CJ40 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CroccQ8CJ40 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CroccQ8CJ40 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CroccQ8CJ40 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CroccQ8CJ40 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CroccQ8CJ40 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CroccQ8CJ40 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.17■□□□□ 0.82
CroccQ8CJ40 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CroccQ8CJ40 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CroccQ8CJ40 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CroccQ8CJ40 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CroccQ8CJ40 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CroccQ8CJ40 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CroccQ8CJ40 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.17■□□□□ 0.82
CroccQ8CJ40 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CroccQ8CJ40 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CroccQ8CJ40 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CroccQ8CJ40 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CroccQ8CJ40 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CroccQ8CJ40 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CroccQ8CJ40 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CroccQ8CJ40 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CroccQ8CJ40 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CroccQ8CJ40 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CroccQ8CJ40 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CroccQ8CJ40 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CroccQ8CJ40 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.15■□□□□ 0.82
CroccQ8CJ40 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.15■□□□□ 0.82
CroccQ8CJ40 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CroccQ8CJ40 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
CroccQ8CJ40 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.14■□□□□ 0.82
CroccQ8CJ40 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CroccQ8CJ40 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.14■□□□□ 0.81
CroccQ8CJ40 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CroccQ8CJ40 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
CroccQ8CJ40 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.14■□□□□ 0.81
CroccQ8CJ40 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CroccQ8CJ40 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.14■□□□□ 0.81
CroccQ8CJ40 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.14■□□□□ 0.81
CroccQ8CJ40 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CroccQ8CJ40 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CroccQ8CJ40 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.13■□□□□ 0.81
CroccQ8CJ40 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CroccQ8CJ40 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CroccQ8CJ40 Gm10232-201ENSMUST00000089221 720 ntBASIC20.13■□□□□ 0.81
CroccQ8CJ40 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.13■□□□□ 0.81
CroccQ8CJ40 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CroccQ8CJ40 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CroccQ8CJ40 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CroccQ8CJ40 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CroccQ8CJ40 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CroccQ8CJ40 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CroccQ8CJ40 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.12■□□□□ 0.81
CroccQ8CJ40 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CroccQ8CJ40 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CroccQ8CJ40 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CroccQ8CJ40 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CroccQ8CJ40 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CroccQ8CJ40 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CroccQ8CJ40 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CroccQ8CJ40 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CroccQ8CJ40 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CroccQ8CJ40 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CroccQ8CJ40 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CroccQ8CJ40 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CroccQ8CJ40 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CroccQ8CJ40 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CroccQ8CJ40 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CroccQ8CJ40 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CroccQ8CJ40 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms