Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.57■□□□□ 0.88
Rab43Q8CG50 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab43Q8CG50 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab43Q8CG50 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab43Q8CG50 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Rab43Q8CG50 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab43Q8CG50 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rab43Q8CG50 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Rab43Q8CG50 Gm45417-201ENSMUST00000209533 758 ntBASIC20.56■□□□□ 0.88
Rab43Q8CG50 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rab43Q8CG50 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab43Q8CG50 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab43Q8CG50 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab43Q8CG50 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab43Q8CG50 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab43Q8CG50 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab43Q8CG50 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab43Q8CG50 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab43Q8CG50 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rab43Q8CG50 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
Rab43Q8CG50 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rab43Q8CG50 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab43Q8CG50 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rab43Q8CG50 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.53■□□□□ 0.88
Rab43Q8CG50 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
Rab43Q8CG50 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rab43Q8CG50 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab43Q8CG50 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rab43Q8CG50 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rab43Q8CG50 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rab43Q8CG50 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rab43Q8CG50 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rab43Q8CG50 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rab43Q8CG50 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Rab43Q8CG50 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Rab43Q8CG50 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rab43Q8CG50 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rab43Q8CG50 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rab43Q8CG50 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rab43Q8CG50 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Rab43Q8CG50 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rab43Q8CG50 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rab43Q8CG50 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.51■□□□□ 0.87
Rab43Q8CG50 Serp2-204ENSMUST00000228055 705 ntBASIC20.51■□□□□ 0.87
Rab43Q8CG50 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rab43Q8CG50 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.51■□□□□ 0.87
Rab43Q8CG50 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rab43Q8CG50 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rab43Q8CG50 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rab43Q8CG50 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rab43Q8CG50 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rab43Q8CG50 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Rab43Q8CG50 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rab43Q8CG50 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rab43Q8CG50 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.5■□□□□ 0.87
Rab43Q8CG50 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rab43Q8CG50 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rab43Q8CG50 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rab43Q8CG50 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Rab43Q8CG50 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.5■□□□□ 0.87
Rab43Q8CG50 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rab43Q8CG50 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rab43Q8CG50 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.5■□□□□ 0.87
Rab43Q8CG50 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rab43Q8CG50 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rab43Q8CG50 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rab43Q8CG50 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rab43Q8CG50 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Rab43Q8CG50 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab43Q8CG50 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.49■□□□□ 0.87
Rab43Q8CG50 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab43Q8CG50 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab43Q8CG50 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab43Q8CG50 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rab43Q8CG50 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Rab43Q8CG50 Gm9870-201ENSMUST00000063874 645 ntBASIC20.48■□□□□ 0.87
Rab43Q8CG50 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rab43Q8CG50 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab43Q8CG50 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab43Q8CG50 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Rab43Q8CG50 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab43Q8CG50 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.46■□□□□ 0.87
Rab43Q8CG50 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Rab43Q8CG50 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab43Q8CG50 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.46■□□□□ 0.87
Rab43Q8CG50 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.46■□□□□ 0.87
Rab43Q8CG50 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rab43Q8CG50 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab43Q8CG50 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab43Q8CG50 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rab43Q8CG50 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab43Q8CG50 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab43Q8CG50 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rab43Q8CG50 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Rab43Q8CG50 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.44■□□□□ 0.86
Rab43Q8CG50 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Rab43Q8CG50 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rab43Q8CG50 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.44■□□□□ 0.86
Rab43Q8CG50 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rab43Q8CG50 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms